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Magnesium in PDB 9j1q: Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita

Enzymatic activity of Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita

All present enzymatic activity of Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita:
1.11.2.1;

Protein crystallography data

The structure of Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita, PDB code: 9j1q was solved by W.Liu, J.Zhang, W.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.51 / 1.34
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.79, 57.73, 58.77, 90, 105.95, 90
R / Rfree (%) 15.5 / 17.3

Other elements in 9j1q:

The structure of Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita also contains other interesting chemical elements:

Iron (Fe) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita (pdb code 9j1q). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita, PDB code: 9j1q:

Magnesium binding site 1 out of 1 in 9j1q

Go back to Magnesium Binding Sites List in 9j1q
Magnesium binding site 1 out of 1 in the Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:7.8
occ:1.00
 OE2 A:GLU122 2.1 8.3 1.0
O A:HOH653 2.1 8.2 1.0
O A:GLY123 2.1 8.0 1.0
O A:HOH585 2.1 7.9 1.0
OG A:SER126 2.1 7.8 1.0
O2A A:HEM403 2.1 8.0 1.0
CGA A:HEM403 3.1 9.1 1.0
CD A:GLU122 3.1 8.7 1.0
C A:GLY123 3.2 7.9 1.0
CB A:SER126 3.4 8.1 1.0
O1A A:HEM403 3.4 8.3 1.0
CG A:GLU122 3.6 8.8 1.0
N A:GLY123 3.6 8.6 1.0
CA A:GLY123 3.9 8.4 1.0
O A:HOH644 4.0 7.8 1.0
O A:HOH613 4.2 7.8 1.0
OE1 A:GLU122 4.2 9.1 1.0
O A:HOH532 4.2 8.8 1.0
N A:ASP124 4.3 8.7 1.0
O A:ASN137 4.3 9.7 1.0
NH2 A:ARG189 4.3 8.9 1.0
N A:SER126 4.4 9.0 1.0
CBA A:HEM403 4.4 10.0 1.0
CA A:SER126 4.4 7.7 1.0
CA A:ASP124 4.6 8.3 1.0
C A:GLU122 4.6 8.7 1.0
CZ A:ARG189 4.7 8.2 1.0
O A:GLY130 4.7 8.0 1.0
C A:ASP124 4.7 7.9 1.0
CB A:GLU122 4.8 7.9 1.0
CB A:ARG129 4.8 8.6 1.0
CA A:GLU122 4.9 9.9 1.0
CB A:ASN137 4.9 8.5 1.0
CAA A:HEM403 4.9 9.1 1.0
O A:ASP124 4.9 8.6 1.0
NE A:ARG189 5.0 8.7 1.0

Reference:

W.Liu, J.Zhang, W.Zhang. Structure of A Mutant (Pada-I) Unspecific Peroxygenase From Agrocybe Aegerita To Be Published.
Page generated: Sat Aug 23 06:04:57 2025

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