Magnesium in PDB 9kk6: Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc

The structure of Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc also contains other interesting chemical elements:

Vanadium

(V)

2 atoms

The binding sites of Magnesium atom in the Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc (pdb code 9kk6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc, PDB code: 9kk6:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1305 b:43.4 occ:1.00 OG A:SER407 2.0 44.9 1.0 O3 A:VO41301 2.1 56.2 1.0 OE1 A:GLN448 2.2 45.2 1.0 O1B A:ADP1302 2.7 43.8 1.0 OE1 A:GLU529 2.8 52.3 1.0 CB A:SER407 3.0 44.9 1.0 CD A:GLN448 3.2 45.2 1.0 CD A:GLU529 3.5 52.3 1.0 OE2 A:GLU529 3.5 52.3 1.0 O1A A:ADP1302 3.8 43.8 1.0 NE2 A:GLN448 3.8 45.2 1.0 PB A:ADP1302 3.8 43.8 1.0 O3B A:ADP1302 3.9 43.8 1.0 V A:VO41301 3.9 56.2 1.0 CA A:SER407 4.3 44.9 1.0 CG A:GLN448 4.4 45.2 1.0 CB A:GLN448 4.5 45.2 1.0 N A:SER407 4.5 44.9 1.0 OD1 A:ASP528 4.6 51.6 1.0 PA A:ADP1302 4.6 43.8 1.0 O1 A:VO41301 4.7 56.2 1.0 O3A A:ADP1302 4.8 43.8 1.0 O2A A:ADP1302 4.8 43.8 1.0 CG A:GLU529 4.8 52.3 1.0 OD2 A:ASP528 4.9 51.6 1.0 O2B A:ADP1302 4.9 43.8 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Vanadate-Trapped ATABCB19 in Lipid Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1306 b:35.9 occ:1.00 O3 A:VO41303 2.1 45.7 1.0 OG A:SER1052 2.2 39.7 1.0 OE1 A:GLN1093 2.4 42.0 1.0 CD A:GLN1093 2.8 42.0 1.0 NE2 A:GLN1093 2.9 42.0 1.0 CB A:SER1052 3.2 39.7 1.0 O1B A:ADP1304 3.5 36.2 1.0 V A:VO41303 3.7 45.7 1.0 O3B A:ADP1304 4.0 36.2 1.0 O1A A:ADP1304 4.0 36.2 1.0 CG A:GLN1093 4.0 42.0 1.0 O1 A:VO41303 4.1 45.7 1.0 PB A:ADP1304 4.3 36.2 1.0 CA A:SER1052 4.5 39.7 1.0 CB A:GLN1093 4.5 42.0 1.0 O2 A:VO41303 4.6 45.7 1.0 N A:GLY506 4.6 34.1 1.0 N A:SER1052 4.6 39.7 1.0

Y.Liu, Y.Liu, M.Liao. N/A N/A.