Magnesium in PDB 9n83: The Ligation Complex in the Nhej Pathway

All present enzymatic activity of The Ligation Complex in the Nhej Pathway:
6.5.1.1;

The binding sites of Magnesium atom in the The Ligation Complex in the Nhej Pathway (pdb code 9n83). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Ligation Complex in the Nhej Pathway, PDB code: 9n83:

Magnesium binding site 1 out of 1 in the The Ligation Complex in the Nhej Pathway


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Ligation Complex in the Nhej Pathway within 5.0Å range: probe atom residue distance (Å) B Occ L:Mg1002 b:80.1 occ:1.00 C3' I:DC68 3.2 64.9 1.0 OP2 L:DA1 3.3 29.5 1.0 O F:GLY276 3.5 80.8 1.0 OP1 L:DA1 3.5 29.3 1.0 OE2 F:GLU331 3.7 77.3 1.0 C4' I:DC68 3.7 65.8 1.0 O F:LEU274 3.8 71.3 1.0 P L:DA1 3.9 25.8 1.0 C5' I:DC68 4.1 66.4 1.0 N F:GLY276 4.1 77.3 1.0 O2' L:AMP1001 4.1 62.9 1.0 C1' L:AMP1001 4.2 59.1 1.0 NZ F:LYS273 4.2 69.3 1.0 C2' I:DC68 4.3 63.6 1.0 OE1 F:GLU427 4.3 87.6 1.0 O4' L:AMP1001 4.4 63.4 1.0 OE2 F:GLU427 4.5 83.8 1.0 CA F:ASP275 4.5 84.5 1.0 C F:GLY276 4.6 74.6 1.0 C4' L:AMP1001 4.7 61.7 1.0 O3P L:AMP1001 4.7 47.3 1.0 CD F:GLU331 4.8 74.4 1.0 C F:ASP275 4.8 83.3 1.0 OD1 F:ASP275 4.8 100.6 1.0 C2' L:AMP1001 4.8 56.2 1.0 CD F:GLU427 4.9 85.1 1.0 C F:LEU274 4.9 72.3 1.0 CA F:GLY276 5.0 75.5 1.0 O5' I:DC68 5.0 66.7 1.0

J.Li, L.Liu, M.Gellert, W.Yang. The Ligation Complex in the Nhej Pathway To Be Published.