Magnesium in PDB 1lm3: A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach

The structure of A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach, PDB code: 1lm3 was solved by S.L.Springs, S.E.Bass, G.Bowman, I.Nodelman, C.E.Schutt, G.L.Mclendon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.70
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.098, 48.995, 114.419, 90.00, 90.00, 90.00
R / Rfree (%)	23.2 / 33.3

The structure of A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach also contains other interesting chemical elements:

Iron

(Fe)

2 atoms

The binding sites of Magnesium atom in the A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach (pdb code 1lm3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach, PDB code: 1lm3:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg107 b:38.5 occ:1.00 OG1 B:THR9 3.1 12.2 1.0 O B:ASP5 3.5 38.3 1.0 CB B:THR9 3.5 11.0 1.0 CB B:ALA1 3.7 1.0 1.0 OD1 B:ASN6 3.8 41.7 1.0 CA B:ASN6 3.9 28.9 1.0 C B:ASP5 3.9 38.6 1.0 N B:ASN6 4.0 29.1 1.0 CG2 B:THR9 4.1 11.3 1.0 CB B:ASP5 4.5 39.0 1.0 CG B:ASN6 4.6 40.6 1.0 CB B:ALA36 4.6 22.9 1.0 O B:ASN6 4.7 28.2 1.0 CB B:ASN6 4.8 38.1 1.0 C B:ASN6 4.8 28.5 1.0 CA B:ASP5 4.8 39.9 1.0 CA B:THR9 4.9 25.2 1.0

Magnesium binding site 2 out of 3 in the A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg107 b:35.9 occ:1.00 OD1 D:ASP74 2.8 52.2 1.0 OD2 D:ASP74 3.5 53.1 1.0 CG D:ASP74 3.5 51.0 1.0 OH B:TYR101 4.3 34.7 1.0 O D:GLY70 4.3 25.1 1.0 NZ B:LYS104 4.5 61.0 1.0 OD1 B:ASP60 4.5 45.2 1.0 CE1 B:HIS63 4.6 25.8 1.0 O D:HOH223 4.7 35.9 1.0 CA D:GLY70 4.8 24.6 1.0 ND1 B:HIS63 4.8 25.9 1.0 C D:GLY70 4.9 23.4 1.0

Magnesium binding site 3 out of 3 in the A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of A Multi-Generation Analysis of Cytochrome B562 Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach within 5.0Å range:

S.L.Springs, S.E.Bass, G.Bowman, I.Nodelman, C.E.Schutt, G.L.Mclendon. A Multigeneration Analysis of Cytochrome B(562) Redox Variants: Evolutionary Strategies For Modulating Redox Potential Revealed Using A Library Approach. Biochemistry V. 41 4321 2002.
ISSN: ISSN 0006-2960
PubMed: 11914078
DOI: 10.1021/BI012066S