Magnesium in PDB 2c2j: Crystal Structure of the DPS92 From Deinococcus Radiodurans

The structure of Crystal Structure of the DPS92 From Deinococcus Radiodurans, PDB code: 2c2j was solved by M.G.Cuypers, C.V.Romao, E.Mitchell, S.Mcsweeney, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	88.74 / 2.05
Space group	P 2 3
Cell size a, b, c (Å), α, β, γ (°)	88.453, 88.453, 88.453, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / n/a

The structure of Crystal Structure of the DPS92 From Deinococcus Radiodurans also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of the DPS92 From Deinococcus Radiodurans (pdb code 2c2j). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the DPS92 From Deinococcus Radiodurans, PDB code: 2c2j:

Magnesium binding site 1 out of 1 in the Crystal Structure of the DPS92 From Deinococcus Radiodurans


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the DPS92 From Deinococcus Radiodurans within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1213 b:20.5 occ:1.00 OD1 A:ASP132 2.2 30.0 1.0 O A:ILE200 2.3 40.5 1.0 O A:HOH2084 2.4 24.8 1.0 OD1 A:ASP133 2.4 25.1 1.0 OD2 A:ASP132 2.5 30.5 1.0 CG A:ASP132 2.7 28.2 1.0 C A:ILE200 3.4 41.5 1.0 CG A:ASP133 3.5 24.9 1.0 OD2 A:ASP133 3.8 22.4 1.0 O A:HOH2126 4.1 40.3 1.0 CB A:ASP132 4.2 26.9 1.0 CA A:ILE200 4.3 40.5 1.0 N A:ASP133 4.3 24.9 1.0 N A:ASN201 4.4 43.6 1.0 CA A:GLY75 4.6 23.1 1.0 CA A:ASN201 4.6 45.4 1.0 N A:ALA134 4.6 24.9 1.0 CB A:ILE200 4.6 40.2 1.0 O A:SER74 4.7 23.4 1.0 CB A:ASP133 4.8 22.9 1.0 CA A:ASP132 4.8 26.1 1.0 C A:ASP132 4.9 25.3 1.0 CB A:ALA134 5.0 26.5 1.0 CA A:ASP133 5.0 24.1 1.0

M.G.Cuypers, E.P.Mitchell, C.V.Romao, S.M.Mcsweeney. The Crystal Structure of the DPS2 From Deinococcus Radiodurans Reveals An Unusual Pore Profile with A Non-Specific Metal Binding Site. J.Mol.Biol. V. 371 787 2007.
ISSN: ISSN 0022-2836
PubMed: 17583727
DOI: 10.1016/J.JMB.2006.11.032