Atomistry » Magnesium » PDB 2hxh-2iea » 2i8c
Atomistry »
  Magnesium »
    PDB 2hxh-2iea »
      2i8c »

Magnesium in PDB 2i8c: Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies

Enzymatic activity of Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies

All present enzymatic activity of Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies:
6.3.2.4;

Protein crystallography data

The structure of Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies, PDB code: 2i8c was solved by S.Liu, J.S.Chang, J.T.Herberg, M.Horng, P.K.Tomich, A.H.Lin, K.R.Marotti, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.51 / 2.46
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.802, 66.972, 78.992, 90.00, 96.05, 90.00
R / Rfree (%) 21 / 26.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies (pdb code 2i8c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies, PDB code: 2i8c:

Magnesium binding site 1 out of 1 in 2i8c

Go back to Magnesium Binding Sites List in 2i8c
Magnesium binding site 1 out of 1 in the Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:80.1
occ:1.00
 O2B B:ADP400 2.1 73.4 1.0
OE2 B:GLU306 2.2 57.2 1.0
O2A B:ADP400 2.2 64.4 1.0
PB B:ADP400 3.2 74.6 1.0
PA B:ADP400 3.3 65.5 1.0
O3A B:ADP400 3.3 69.0 1.0
CD B:GLU306 3.3 52.5 1.0
OE1 B:GLU306 3.8 58.4 1.0
C5' B:ADP400 4.0 63.7 1.0
O5' B:ADP400 4.0 65.9 1.0
O1B B:ADP400 4.1 74.0 1.0
O3' B:ADP400 4.2 63.2 1.0
O3B B:ADP400 4.3 75.9 1.0
C3' B:ADP400 4.4 62.6 1.0
CG B:GLU306 4.6 51.1 1.0
O1A B:ADP400 4.6 63.4 1.0
OD2 B:ASP293 4.7 46.8 1.0
ND2 B:ASN305 4.7 46.9 1.0
C4' B:ADP400 4.8 62.4 1.0
OG B:SER183 5.0 73.3 1.0

Reference:

S.Liu, J.S.Chang, J.T.Herberg, M.M.Horng, P.K.Tomich, A.H.Lin, K.R.Marotti. Allosteric Inhibition of Staphylococcus Aureus D-Alanine:D-Alanine Ligase Revealed By Crystallographic Studies. Proc.Natl.Acad.Sci.Usa V. 103 15178 2006.
ISSN: ISSN 0027-8424
PubMed: 17015835
DOI: 10.1073/PNAS.0604905103
Page generated: Wed Aug 14 00:06:25 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy