Magnesium in PDB 2oda: Crystal Structure of PSPTO_2114

The structure of Crystal Structure of PSPTO_2114, PDB code: 2oda was solved by E.Peisach, K.N.Allen, D.Dunaway-Mariano, L.Wang, A.M.Burroughs, L.Aravind, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.27 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	48.612, 74.427, 106.354, 90.00, 90.00, 90.00
R / Rfree (%)	16.7 / 21.9

The binding sites of Magnesium atom in the Crystal Structure of PSPTO_2114 (pdb code 2oda). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of PSPTO_2114, PDB code: 2oda:

Magnesium binding site 1 out of 1 in the Crystal Structure of PSPTO_2114


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of PSPTO_2114 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:9.1 occ:1.00 O A:HOH630 2.0 7.3 1.0 O A:HOH626 2.0 13.3 1.0 O A:HOH652 2.0 7.1 1.0 O A:HOH615 2.1 6.4 1.0 O A:HOH628 2.1 7.9 1.0 O A:HOH675 2.3 9.6 1.0 OE1 A:GLU154 3.9 11.9 1.0 O A:HOH646 4.0 12.8 1.0 OE2 A:GLU154 4.0 14.0 1.0 OD2 A:ASP174 4.1 11.4 1.0 OD1 A:ASP174 4.2 9.8 1.0 NE A:ARG157 4.3 9.3 1.0 CD A:GLU154 4.4 13.0 1.0 CG A:ASP174 4.6 11.9 1.0 NH2 A:ARG157 4.7 8.1 1.0 O A:HOH640 4.9 15.3 1.0 CZ A:ARG157 5.0 10.0 1.0

E.Peisach, L.Wang, A.M.Burroughs, L.Aravind, D.Dunaway-Mariano, K.N.Allen. The X-Ray Crystallographic Structure and Activity Analysis of A Pseudomonas-Specific Subfamily of the Had Enzyme Superfamily Evidences A Novel Biochemical Function. Proteins V. 70 197 2007.
ISSN: ISSN 0887-3585
PubMed: 17654544
DOI: 10.1002/PROT.21583