Magnesium in PDB 382d: Hydration and Recognition of Methylated Cpg Steps in Dna.

The structure of Hydration and Recognition of Methylated Cpg Steps in Dna., PDB code: 382d was solved by C.Mayer-Jung, D.Moras, Y.Timsit, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	7.00 / 2.20
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	41.500, 41.500, 57.500, 90.00, 90.00, 120.00
R / Rfree (%)	19.7 / n/a

The binding sites of Magnesium atom in the Hydration and Recognition of Methylated Cpg Steps in Dna. (pdb code 382d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Hydration and Recognition of Methylated Cpg Steps in Dna., PDB code: 382d:

Magnesium binding site 1 out of 1 in the Hydration and Recognition of Methylated Cpg Steps in Dna.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Hydration and Recognition of Methylated Cpg Steps in Dna. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg11 b:40.3 occ:1.00 O A:HOH47 1.9 35.2 1.0 O A:HOH44 2.0 24.8 1.0 O A:HOH48 2.1 46.6 1.0 O A:HOH46 2.5 40.1 1.0 O A:HOH45 2.5 33.1 1.0 O A:HOH49 2.5 23.0 1.0 O A:HOH13 3.6 32.3 1.0 O A:HOH23 3.7 42.9 1.0 O A:HOH12 4.3 33.8 1.0 O A:HOH17 4.4 33.5 1.0 N4 A:DC4 4.7 12.7 1.0 O6 A:DG3 4.7 13.9 1.0 O A:HOH14 4.7 31.1 1.0 O A:HOH20 4.8 39.4 1.0

C.Mayer-Jung, D.Moras, Y.Timsit. Hydration and Recognition of Methylated Cpg Steps in Dna. Embo J. V. 17 2709 1998.
ISSN: ISSN 0261-4189
PubMed: 9564052
DOI: 10.1093/EMBOJ/17.9.2709