Magnesium in PDB 3bjs: Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666

The structure of Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666, PDB code: 3bjs was solved by Y.Patskovsky, J.B.Bonanno, S.Ozyurt, M.Dickey, J.M.Sauder, C.Reyes, C.Groshong, T.Gheyi, D.Smith, S.R.Wasserman, J.Gerlt, S.K.Burley, S.C.Almo, New York Sgx Research Center For Structural Genomics(Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.70
Space group	F 4 3 2 1
Cell size a, b, c (Å), α, β, γ (°)	274.640, 274.640, 274.640, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 26.3

The binding sites of Magnesium atom in the Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666 (pdb code 3bjs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666, PDB code: 3bjs:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:57.7 occ:1.00 OD2 A:ASP233 2.2 74.2 1.0 OE2 A:GLU286 2.3 94.4 1.0 CD A:GLU286 2.9 88.4 1.0 OE1 A:GLU259 3.1 74.2 1.0 OE1 A:GLU286 3.2 85.6 1.0 CG A:ASP233 3.4 57.9 1.0 NZ A:LYS203 3.5 67.2 1.0 CD A:GLU259 3.7 62.9 1.0 NE2 A:HIS336 3.8 63.4 1.0 NH1 A:ARG205 3.8 74.8 1.0 CD2 A:HIS336 3.8 60.2 1.0 OD1 A:ASP233 3.9 61.2 1.0 ND2 A:ASN235 3.9 60.9 1.0 CG A:GLU286 4.0 70.9 1.0 CE A:LYS203 4.3 56.5 1.0 OE2 A:GLU259 4.3 56.9 1.0 NH2 A:ARG205 4.4 64.7 1.0 CG A:GLU259 4.4 49.9 1.0 CZ A:ARG205 4.4 72.1 1.0 OE1 A:GLU361 4.5 75.8 1.0 CB A:ASP233 4.6 51.4 1.0 CG A:ASN235 4.8 64.6 1.0 CE1 A:HIS336 4.9 66.6 1.0 OD1 A:ASN235 5.0 76.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:62.8 occ:1.00 OE2 B:GLU286 2.3 88.4 1.0 OD2 B:ASP233 2.3 71.3 1.0 OE1 B:GLU259 2.5 75.7 1.0 CD B:GLU286 3.2 73.0 1.0 OE1 B:GLU286 3.4 92.8 1.0 CG B:ASP233 3.5 53.7 1.0 CD B:GLU259 3.5 54.6 1.0 NZ B:LYS203 3.7 59.9 1.0 CD2 B:HIS336 3.7 54.2 1.0 OD1 B:ASN235 3.8 56.2 1.0 NE2 B:HIS336 3.8 60.8 1.0 OD1 B:ASP233 4.0 69.4 1.0 NH1 B:ARG205 4.1 83.9 1.0 CG B:GLU259 4.3 56.4 1.0 OE2 B:GLU259 4.3 59.9 1.0 CG B:GLU286 4.4 68.0 1.0 NH2 B:ARG205 4.5 65.8 1.0 CE B:LYS203 4.5 49.8 1.0 OE1 B:GLU260 4.5 76.3 1.0 CZ B:ARG205 4.6 76.7 1.0 CB B:GLU286 4.7 48.5 1.0 CB B:ASP233 4.7 46.0 1.0 O B:HOH619 4.8 51.8 1.0 CG B:ASN235 4.8 62.9 1.0 OE1 B:GLU361 4.9 72.2 1.0 CG B:HIS336 4.9 53.8 1.0

Y.Patskovsky, J.B.Bonanno, S.Ozyurt, M.Dickey, J.M.Sauder, C.Reyes, C.Groshong, T.Gheyi, D.Smith, S.R.Wasserman, J.Gerlt, S.K.Burley, S.C.Almo. Crystal Structure of A Member of Enolase Superfamily From Polaromonas Sp. JS666. To Be Published.