Atomistry » Magnesium » PDB 3wqd-3x1l » 3x1l
Atomistry »
  Magnesium »
    PDB 3wqd-3x1l »
      3x1l »

Magnesium in PDB 3x1l: Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog

Protein crystallography data

The structure of Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog, PDB code: 3x1l was solved by T.Osawa, T.Numata, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.34 / 2.10
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 75.489, 76.215, 139.188, 90.32, 104.83, 118.58
R / Rfree (%) 20.8 / 24.6

Other elements in 3x1l:

The structure of Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog (pdb code 3x1l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog, PDB code: 3x1l:

Magnesium binding site 1 out of 1 in 3x1l

Go back to Magnesium Binding Sites List in 3x1l
Magnesium binding site 1 out of 1 in the Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg401

b:25.0
occ:1.00
OE2 B:GLU200 2.1 24.0 1.0
O I:HOH122 2.1 26.9 1.0
O I:HOH123 2.1 19.0 1.0
O B:HOH522 2.1 21.3 1.0
O I:HOH121 2.2 22.4 1.0
N7 I:A6 2.3 23.0 1.0
CD B:GLU200 3.1 25.2 1.0
C8 I:A6 3.1 24.3 1.0
C5 I:A6 3.4 22.8 1.0
OE1 B:GLU200 3.4 22.4 1.0
N6 I:A6 3.7 25.2 1.0
C6 I:A6 4.0 24.6 1.0
N7 I:A5 4.2 25.1 1.0
OP2 I:A5 4.2 23.8 1.0
CE2 B:PHE20 4.3 24.7 1.0
N7 I:A7 4.3 23.0 1.0
C8 I:A5 4.3 23.6 1.0
N9 I:A6 4.4 23.2 1.0
CG B:GLU200 4.4 25.8 1.0
CA B:GLU200 4.4 22.9 1.0
C4 I:A6 4.5 25.6 1.0
OP2 I:A6 4.6 23.1 1.0
N B:GLU200 4.7 26.4 1.0
C8 I:A7 4.9 24.6 1.0
CB B:GLU200 4.9 24.3 1.0
CD2 B:PHE20 5.0 26.3 1.0

Reference:

T.Osawa, H.Inanaga, C.Sato, T.Numata. Crystal Structure of the Crispr-Cas Rna Silencing Cmr Complex Bound to A Target Analog Mol.Cell 2015.
ISSN: ISSN 1097-2765
PubMed: 25921071
DOI: 10.1016/J.MOLCEL.2015.03.018
Page generated: Mon Aug 11 05:06:21 2025

Last articles

Mg in 6KPE
Mg in 6KOQ
Mg in 6KNZ
Mg in 6KOP
Mg in 6KON
Mg in 6KOO
Mg in 6KO6
Mg in 6KO1
Mg in 6KMA
Mg in 6KO0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy