Magnesium in PDB 4crm: Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1

The structure of Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1 also contains other interesting chemical elements:

Iron

(Fe)

8 atoms

The binding sites of Magnesium atom in the Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1 (pdb code 4crm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1, PDB code: 4crm:

Magnesium binding site 1 out of 1 in the Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em of A Pre-Recycling Complex with ERF1 and ABCE1 within 5.0Å range: probe atom residue distance (Å) B Occ P:Mg1613 b:43.9 occ:1.00 OG P:SER117 1.2 0.0 1.0 O2B P:ATP1609 2.2 42.4 1.0 CB P:SER117 2.5 0.0 1.0 O1G P:ATP1609 2.7 46.4 1.0 CA P:SER117 3.4 0.0 1.0 CG P:GLN171 3.4 0.0 1.0 PB P:ATP1609 3.4 44.2 1.0 N P:SER117 3.5 0.0 1.0 PG P:ATP1609 3.8 47.6 1.0 CD P:GLN171 3.8 0.0 1.0 NZ P:LYS116 3.8 0.0 1.0 O3B P:ATP1609 4.0 45.4 1.0 OD2 P:ASP246 4.0 0.0 1.0 O3A P:ATP1609 4.0 53.3 1.0 OE1 P:GLN171 4.0 0.0 1.0 O1A P:ATP1609 4.1 56.3 1.0 OE2 P:GLU247 4.3 0.0 1.0 CB P:GLN171 4.3 0.0 1.0 PA P:ATP1609 4.3 57.0 1.0 O3G P:ATP1609 4.4 49.2 1.0 C P:LYS116 4.5 0.0 1.0 OD1 P:ASP246 4.6 0.0 1.0 NE2 P:GLN171 4.6 0.0 1.0 OH P:TYR172 4.6 0.0 1.0 CB P:LYS116 4.6 0.0 1.0 CG P:ASP246 4.7 0.0 1.0 O1B P:ATP1609 4.7 38.1 1.0 C P:SER117 4.7 0.0 1.0 CZ P:TYR172 4.9 0.0 1.0

A.Preis, A.Heuer, C.Barrio-Garcia, A.Hauser, D.E.Eyler, O.Berninghausen, R.Green, T.Becker, R.Beckmann. Cryoelectron Microscopic Structures of Eukaryotic Translation Termination Complexes Containing ERF1-ERF3 or ERF1-ABCE1. Cell Rep. V. 8 59 2014.
ISSN: ISSN 2211-1247
PubMed: 25001285
DOI: 10.1016/J.CELREP.2014.04.058