Magnesium in PDB 4dsc: Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A

The structure of Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A, PDB code: 4dsc was solved by X.Zhang, Z.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.81 / 1.95
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	232.836, 232.836, 53.292, 90.00, 90.00, 120.00
R / Rfree (%)	18.5 / 21.1

The binding sites of Magnesium atom in the Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A (pdb code 4dsc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A, PDB code: 4dsc:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:22.6 occ:1.00 OE1 A:GLU170 2.6 20.6 1.0 O12 A:A8S301 2.7 15.6 1.0 OG A:SER146 2.7 22.1 1.0 OH A:TYR144 2.8 22.4 1.0 CB A:SER146 3.2 22.3 1.0 O A:HOH428 3.4 15.8 1.0 CD A:GLU170 3.5 19.9 1.0 C1 A:A8S301 3.5 13.7 1.0 C2 A:A8S301 3.5 15.0 1.0 CE2 A:TYR144 3.6 23.5 1.0 CE1 A:PHE132 3.6 20.6 1.0 CZ A:TYR144 3.6 23.2 1.0 CZ A:PHE132 3.9 20.7 1.0 O A:HOH603 4.0 15.3 1.0 CG A:GLU170 4.1 19.8 1.0 OE2 A:GLU170 4.2 19.9 1.0 O A:HOH401 4.4 12.6 1.0 O A:HOH431 4.5 15.8 1.0 O11 A:A8S301 4.6 14.4 1.0 CG2 A:VAL193 4.6 18.4 1.0 CA A:SER146 4.7 22.2 1.0 C3 A:A8S301 4.7 14.6 1.0 CD1 A:PHE132 4.7 19.5 1.0 CD2 A:TYR144 4.9 24.2 1.0 CE1 A:TYR144 5.0 24.4 1.0 NZ A:LYS79 5.0 20.8 1.0

Magnesium binding site 2 out of 2 in the Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:22.7 occ:1.00 OE1 B:GLU170 2.6 19.1 1.0 OH B:TYR144 2.7 22.9 1.0 O12 B:A8S301 2.8 14.6 1.0 OG B:SER146 2.8 19.8 1.0 CB B:SER146 3.3 19.6 1.0 C2 B:A8S301 3.4 14.2 1.0 O B:HOH447 3.5 13.9 1.0 CD B:GLU170 3.5 18.8 1.0 C1 B:A8S301 3.5 13.4 1.0 CE2 B:TYR144 3.5 23.2 1.0 CZ B:TYR144 3.5 23.1 1.0 CE1 B:PHE132 3.6 18.7 1.0 CZ B:PHE132 3.9 18.8 1.0 O B:HOH672 4.1 14.6 1.0 CG B:GLU170 4.2 18.1 1.0 OE2 B:GLU170 4.2 18.9 1.0 O B:HOH610 4.4 12.5 1.0 CG2 B:VAL193 4.5 17.1 1.0 C3 B:A8S301 4.6 15.3 1.0 O B:HOH612 4.6 16.1 1.0 O11 B:A8S301 4.7 14.5 1.0 CD1 B:PHE132 4.7 17.7 1.0 CA B:SER146 4.8 19.7 1.0 CE1 B:TYR144 4.8 23.2 1.0 CD2 B:TYR144 4.9 23.1 1.0 NZ B:LYS79 4.9 18.8 1.0

X.Zhang, Q.Zhang, Q.Xin, L.Yu, Z.Wang, W.Wu, L.Jiang, G.Wang, W.Tian, Z.Deng, Y.Wang, Z.Liu, J.Long, Z.Gong, Z.Chen. Complex Structures of the Abscisic Acid Receptor PYL3/RCAR13 Reveal A Unique Regulatory Mechanism Structure V. 20 780 2012.
ISSN: ISSN 0969-2126
PubMed: 22579247
DOI: 10.1016/J.STR.2012.02.019