Magnesium in PDB, part 188 (files: 7481-7520),
PDB 4doa-4dv5
Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Magnesium atoms. PDB files: 7481-7520 (PDB 4doa-4dv5).
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4doa (Mg: 1) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monofluoromethylene Triphosphate: Non-Interactive Binding of S-Isomer
Other atoms:
F (1);
Cl (5);
Na (3);
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4dob (Mg: 1) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monochlororomethylene Triphosphate: Stereoselective Binding of R-Isomer
Other atoms:
Cl (6);
Na (3);
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4doc (Mg: 1) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monochlororomethylene Triphosphate:Binding of S-Isomer
Other atoms:
Cl (6);
Na (3);
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4dpg (Mg: 12) - Crystal Structure of Human Lysrs: P38/AIMP2 Complex I
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4dpm (Mg: 6) - Structure of Malonyl-Coenzyme A Reductase From Crenarchaeota in Complex with Coa
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4dpv (Mg: 4) - Parvovirus/Dna Complex
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4dqi (Mg: 2) - Ternary Complex of Bacillus Dna Polymerase I Large Fragment, Dna Duplex, and Dctp (Paired with Dg of Template)
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4dqp (Mg: 2) - Ternary Complex of Bacillus Dna Polymerase I Large Fragment, Dna Duplex, and Ddctp (Paired with Dg of Template)
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4dqq (Mg: 1) - Ternary Complex of Bacillus Dna Polymerase I Large Fragment E658A, Dna Duplex, and Rctp (Paired with Dg of Template) in Presence of MG2+
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4dr1 (Mg: 254) - Crystal Structure of the Apo 30S Ribosomal Subunit From Thermus Thermophilus (HB8)
Other atoms:
Zn (2);
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4dr2 (Mg: 327) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Multiple Copies of Paromomycin Molecules Bound
Other atoms:
Zn (2);
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4dr3 (Mg: 264) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Streptomycin Bound
Other atoms:
Zn (2);
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4dr4 (Mg: 363) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Cognate Transfer Rna Anticodon Stem-Loop and Multiple Copies of Paromomycin Molecules Bound
Other atoms:
Zn (2);
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4dr5 (Mg: 272) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Crystallographically Disordered Cognate Transfer Rna Anticodon Stem-Loop and Streptomycin Bound
Other atoms:
Zn (2);
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4dr6 (Mg: 377) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched at the First Codon Position and Streptomycin Bound
Other atoms:
Zn (2);
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4dr7 (Mg: 344) - Crystal Structure of the Thermus Thermophilus (HB8) 30S Ribosomal Subunit with Codon, Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched at the Second Codon Position, and Streptomycin Bound
Other atoms:
Zn (2);
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4drx (Mg: 4) - Gtp-Tubulin in Complex with A Darpin
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4ds6 (Mg: 16) - Crystal Structure of A Group II Intron in the Pre-Catalytic State
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4dsc (Mg: 2) - Complex Structure of Abscisic Acid Receptor PYL3 with (+)-Aba in Spacegroup of H32 at 1.95A
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4dsn (Mg: 2) - Small-Molecule Ligands Bind to A Distinct Pocket in Ras and Inhibit Sos-Mediated Nucleotide Exchange Activity
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4dso (Mg: 1) - Small-Molecule Ligands Bind to A Distinct Pocket in Ras and Inhibit Sos-Mediated Nucleotide Exchange Activity
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4dst (Mg: 2) - Small-Molecule Ligands Bind to A Distinct Pocket in Ras and Inhibit Sos-Mediated Nucleotide Exchange Activity
Other atoms:
Cl (2);
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4dsu (Mg: 1) - Small-Molecule Ligands Bind to A Distinct Pocket in Ras and Inhibit Sos-Mediated Nucleotide Exchange Activity
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4dtf (Mg: 2) - Structure of A Vgrg Vibrio Cholerae Toxin Acd Domain in Complex with Amp-Pnp and Mg++
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4dth (Mg: 2) - Structure of A Vgrg Vibrio Cholerae Toxin Acd Domain in Complex with Atp and Mg++
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4dtw (Mg: 1) - Cytochrome P450 BM3H-8C8 Mri Sensor Bound to Serotonin
Other atoms:
Fe (2);
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4dty (Mg: 1) - Cytochrome P450 BM3H-8C8 Mri Sensor, No Ligand
Other atoms:
Fe (2);
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4dug (Mg: 12) - Crystal Structure of Circadian Clock Protein Kaic E318A Mutant
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4duo (Mg: 2) - Room-Temperature X-Ray Structure of D-Xylose Isomerase in Complex with 2MG2+ Ions and Xylitol at pH 7.7
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4duv (Mg: 9) - E. Coli (Lacz) Beta-Galactosidase (G974A) 2-Deoxy-Galactosyl-Enzyme and Bis-Tris Complex
Other atoms:
Na (16);
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4duw (Mg: 10) - E. Coli (Lacz) Beta-Galactosidase (G974A) in Complex with Allolactose
Other atoms:
Na (16);
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4dux (Mg: 8) - E. Coli (Lacz) Beta-Galactosidase (N460S) in Complex with L-Ribose
Other atoms:
Na (14);
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4duy (Mg: 312) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U13C
Other atoms:
Zn (2);
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4duz (Mg: 267) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U13C, Bound with Streptomycin
Other atoms:
Zn (2);
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4dv0 (Mg: 277) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U20G
Other atoms:
Zn (2);
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4dv1 (Mg: 247) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, U20G, Bound with Streptomycin
Other atoms:
Zn (2);
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4dv2 (Mg: 289) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, C912A
Other atoms:
Zn (2);
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4dv3 (Mg: 281) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, C912A, Bound with Streptomycin
Other atoms:
Zn (2);
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4dv4 (Mg: 287) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A914G
Other atoms:
Zn (2);
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4dv5 (Mg: 273) - Crystal Structure of the Thermus Thermophilus 30S Ribosomal Subunit with A 16S Rrna Mutation, A914G, Bound with Streptomycin
Other atoms:
Zn (2);
Page generated: Sun Dec 15 11:02:06 2024
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