Magnesium in PDB 4e7o: Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae

Protein crystallography data

The structure of Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae, PDB code: 4e7o was solved by A.K.Park, J.H.Moon, K.S.Lee, Y.M.Chi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.41 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.868, 44.950, 59.304, 90.00, 98.98, 90.00
R / Rfree (%) 21.4 / 27.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae (pdb code 4e7o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae, PDB code: 4e7o:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4e7o

Go back to Magnesium Binding Sites List in 4e7o
Magnesium binding site 1 out of 2 in the Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:49.3
occ:1.00
OD1 A:ASP8 2.5 51.1 1.0
OD1 A:ASP53 2.6 56.4 1.0
O A:GLU55 2.6 48.8 1.0
CG A:ASP53 3.3 50.0 1.0
CG A:ASP8 3.3 49.1 1.0
OD2 A:ASP53 3.4 49.4 1.0
OD2 A:ASP8 3.4 45.9 1.0
OE1 A:GLN9 3.5 58.0 1.0
OE2 A:GLU7 3.7 45.1 1.0
C A:GLU55 3.7 51.1 1.0
NZ A:LYS103 3.9 49.2 1.0
CB A:GLU55 4.2 64.9 1.0
CA A:GLU55 4.4 58.8 1.0
CD A:GLN9 4.4 54.1 1.0
CD A:GLU7 4.5 52.0 1.0
CG A:GLN9 4.6 51.4 1.0
CB A:ASP53 4.6 46.0 1.0
N A:GLU55 4.6 53.7 1.0
OE1 A:GLU7 4.6 43.1 1.0
N A:ASP8 4.7 45.5 1.0
CB A:ASP8 4.7 47.1 1.0
N A:MET56 4.7 50.5 1.0
CG A:MET56 4.8 48.7 1.0
CA A:MET56 5.0 49.8 1.0

Magnesium binding site 2 out of 2 in 4e7o

Go back to Magnesium Binding Sites List in 4e7o
Magnesium binding site 2 out of 2 in the Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg201

b:61.6
occ:1.00
OD2 B:ASP53 2.5 53.5 1.0
OD1 B:ASP8 2.6 57.6 1.0
O B:GLU55 2.8 56.2 1.0
OE1 B:GLN9 3.1 59.7 1.0
CG B:ASP53 3.4 51.2 1.0
OD1 B:ASP53 3.5 47.3 1.0
CG B:ASP8 3.5 52.8 1.0
OD2 B:ASP8 3.7 55.6 1.0
NZ B:LYS103 3.9 42.6 1.0
C B:GLU55 3.9 56.2 1.0
CB B:GLU55 3.9 53.5 1.0
O B:HOH317 4.0 50.2 1.0
CD B:GLN9 4.1 65.4 1.0
OE2 B:GLU7 4.1 44.2 1.0
CA B:GLU55 4.3 55.0 1.0
N B:GLU55 4.6 52.0 1.0
CB B:ASP53 4.8 47.1 1.0
CG B:GLN9 4.8 44.9 1.0
CB B:ASP8 4.9 50.4 1.0

Reference:

A.K.Park, J.H.Moon, K.S.Lee, Y.M.Chi. Crystal Structure of Receiver Domain of Putative Narl Family Response Regulator SPR1814 From Streptococcus Pneumoniae in the Absence and Presence of the Phosphoryl Analog Beryllofluoride. Biochem.Biophys.Res.Commun. V. 421 403 2012.
ISSN: ISSN 0006-291X
PubMed: 22521891
DOI: 10.1016/J.BBRC.2012.04.035
Page generated: Mon Dec 14 13:39:22 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy