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Magnesium in PDB 4f1z: Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb

Protein crystallography data

The structure of Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb, PDB code: 4f1z was solved by M.J.Yang, H.Xiang, J.W.Wang, B.Liu, Y.G.Chen, L.Liu, X.M.Deng, Y.Feng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.19 / 2.30
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 70.331, 70.331, 177.157, 90.00, 90.00, 120.00
R / Rfree (%) 24.7 / 25.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb (pdb code 4f1z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb, PDB code: 4f1z:

Magnesium binding site 1 out of 1 in 4f1z

Go back to Magnesium Binding Sites List in 4f1z
Magnesium binding site 1 out of 1 in the Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structures Reveal the Multi-Ligand Binding Mechanism of the Staphylococcus Aureus Clfb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:72.2
occ:1.00
O A:TYR468 2.8 0.8 1.0
O A:TYR470 2.9 0.1 1.0
O A:VAL424 3.1 89.5 1.0
N A:ASN472 3.5 88.9 1.0
C A:TYR468 3.9 0.4 1.0
C A:TYR470 3.9 1.0 1.0
CA A:ASP471 3.9 98.2 1.0
C A:ASP471 4.0 93.1 1.0
O A:LYS469 4.1 0.5 1.0
O A:VAL473 4.1 85.8 1.0
CA A:SER425 4.1 98.1 1.0
C A:VAL424 4.2 87.7 1.0
N A:VAL473 4.2 77.6 1.0
CB A:TYR468 4.3 0.8 1.0
N A:ASP471 4.4 99.1 1.0
CA A:ASN472 4.4 81.8 1.0
CA A:TYR468 4.4 0.7 1.0
CB A:SER425 4.4 97.0 1.0
C A:LYS469 4.5 0.2 1.0
N A:SER425 4.6 94.8 1.0
C A:ASN472 4.8 79.8 1.0
N A:TYR470 4.9 0.6 1.0
OD1 A:ASP471 5.0 0.9 1.0
N A:LYS469 5.0 0.7 1.0

Reference:

H.Xiang, Y.Feng, J.W.Wang, B.Liu, Y.G.Chen, L.Liu, X.M.Deng, M.J.Yang. Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus Aureus Clfb Plos Pathog. V. 8 02751 2012.
ISSN: ISSN 1553-7366
PubMed: 22719251
DOI: 10.1371/JOURNAL.PPAT.1002751
Page generated: Mon Aug 11 12:34:09 2025

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