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Magnesium in PDB 4f2l: Structure of A Regulatory Domain of Ampk

Enzymatic activity of Structure of A Regulatory Domain of Ampk

All present enzymatic activity of Structure of A Regulatory Domain of Ampk:
2.7.11.1; 2.7.11.26;

Protein crystallography data

The structure of Structure of A Regulatory Domain of Ampk, PDB code: 4f2l was solved by F.J.Xin, Y.Y.Zhang, J.Wang, Z.X.Wang, J.W.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.37 / 1.50
Space group P 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 22.117, 36.258, 98.755, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Regulatory Domain of Ampk (pdb code 4f2l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Regulatory Domain of Ampk, PDB code: 4f2l:

Magnesium binding site 1 out of 1 in 4f2l

Go back to Magnesium Binding Sites List in 4f2l
Magnesium binding site 1 out of 1 in the Structure of A Regulatory Domain of Ampk


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Regulatory Domain of Ampk within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:18.8
occ:0.69
O A:HOH576 2.0 55.0 1.0
O A:HOH574 2.0 58.1 1.0
O A:HOH573 2.1 54.2 1.0
O A:HOH575 2.1 58.4 1.0
O A:HOH577 2.3 18.7 1.0
O A:HOH572 2.4 46.1 1.0
O A:HOH530 3.9 33.3 1.0
ND1 A:HIS341 4.2 14.1 1.0
O A:HIS344 4.3 28.2 1.0
O A:HIS341 4.4 16.8 1.0
CE1 A:HIS341 4.8 14.9 1.0
CA A:HIS341 5.0 13.1 1.0

Reference:

L.Chen, F.J.Xin, J.Wang, J.Hu, Y.Y.Zhang, S.Wan, L.S.Cao, C.Lu, P.Li, S.F.Yan, D.Neumann, U.Schlattner, B.Xia, Z.X.Wang, J.W.Wu. Conserved Regulatory Elements in Ampk Nature V. 498 E8 2013.
ISSN: ISSN 0028-0836
PubMed: 23765502
DOI: 10.1038/NATURE12189
Page generated: Mon Dec 14 14:45:48 2020

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