Magnesium in PDB 4f6r: Tubulin:Stathmin-Like Domain Complex

The structure of Tubulin:Stathmin-Like Domain Complex, PDB code: 4f6r was solved by B.Gigant, I.Mignot, M.Knossow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.45 / 2.64
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	95.060, 75.570, 155.680, 90.00, 96.29, 90.00
R / Rfree (%)	17.7 / 20.1

The binding sites of Magnesium atom in the Tubulin:Stathmin-Like Domain Complex (pdb code 4f6r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Tubulin:Stathmin-Like Domain Complex, PDB code: 4f6r:

Magnesium binding site 1 out of 1 in the Tubulin:Stathmin-Like Domain Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Tubulin:Stathmin-Like Domain Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:48.6 occ:1.00 O A:HOH638 1.9 51.7 1.0 O A:HOH603 1.9 35.4 1.0 O A:HOH601 2.1 35.2 1.0 O A:HOH602 2.2 36.7 1.0 O1B A:GTP501 2.2 42.6 1.0 O1G A:GTP501 2.2 46.8 1.0 PG A:GTP501 3.2 44.6 1.0 PB A:GTP501 3.3 44.9 1.0 O3B A:GTP501 3.5 47.3 1.0 O2G A:GTP501 3.6 42.1 1.0 O3A A:GTP501 3.8 47.7 1.0 OD2 A:ASP69 3.9 49.6 1.0 NZ B:LYS254 4.1 72.0 1.0 OD1 A:ASP69 4.2 52.6 1.0 OD2 A:ASP98 4.2 71.4 1.0 CB A:GLN11 4.2 38.2 1.0 N A:GLN11 4.3 38.0 1.0 CG A:GLU71 4.3 72.2 1.0 CB A:ASP98 4.5 55.5 1.0 CG A:ASP69 4.5 50.9 1.0 O2B A:GTP501 4.5 46.8 1.0 O3G A:GTP501 4.6 44.5 1.0 O1A A:GTP501 4.6 43.1 1.0 CG A:ASP98 4.7 67.1 1.0 PA A:GTP501 4.8 47.4 1.0 OE1 A:GLN11 4.9 69.4 1.0 CA A:GLN11 4.9 37.2 1.0 OG1 A:THR145 5.0 48.1 1.0

I.Mignot, L.Pecqueur, A.Dorleans, M.Karuppasamy, R.B.Ravelli, B.Dreier, A.Pluckthun, M.Knossow, B.Gigant. Design and Characterization of Modular Scaffolds For Tubulin Assembly. J.Biol.Chem. V. 287 31085 2012.
ISSN: ISSN 0021-9258
PubMed: 22791712
DOI: 10.1074/JBC.M112.383869