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Magnesium in PDB 4hpp: Crystal Structure of Novel Glutamine Synthase Homolog

Enzymatic activity of Crystal Structure of Novel Glutamine Synthase Homolog

All present enzymatic activity of Crystal Structure of Novel Glutamine Synthase Homolog:
6.3.1.11;

Protein crystallography data

The structure of Crystal Structure of Novel Glutamine Synthase Homolog, PDB code: 4hpp was solved by J.E.Ladner, V.Atanasova, Z.Dolezelova, J.F.Parsons, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.50
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 140.010, 140.010, 45.030, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 29.2

Other elements in 4hpp:

The structure of Crystal Structure of Novel Glutamine Synthase Homolog also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Novel Glutamine Synthase Homolog (pdb code 4hpp). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Novel Glutamine Synthase Homolog, PDB code: 4hpp:

Magnesium binding site 1 out of 1 in 4hpp

Go back to Magnesium Binding Sites List in 4hpp
Magnesium binding site 1 out of 1 in the Crystal Structure of Novel Glutamine Synthase Homolog


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Novel Glutamine Synthase Homolog within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:40.2
occ:1.00
OE2 A:GLU503 2.0 71.8 1.0
OE1 A:GLU180 2.1 52.1 1.0
OE2 A:GLU133 2.2 50.4 1.0
OE2 A:GLU187 2.5 52.5 1.0
CD A:GLU187 3.2 57.9 1.0
O A:HOH668 3.2 75.9 1.0
CD A:GLU503 3.2 67.5 1.0
CD A:GLU180 3.3 49.8 1.0
CD A:GLU133 3.3 51.7 1.0
OE1 A:GLU187 3.4 69.4 1.0
CG A:GLU133 4.0 43.0 1.0
OE1 A:GLU503 4.1 79.3 1.0
OE2 A:GLU180 4.1 53.1 1.0
CG A:GLU180 4.1 51.6 1.0
CG A:GLU503 4.1 68.9 1.0
OE1 A:GLU133 4.3 42.9 1.0
CB A:GLU503 4.4 70.3 1.0
CG A:GLU187 4.4 59.2 1.0
OE2 A:GLU131 4.7 70.4 1.0
CB A:GLU187 4.8 53.1 1.0
CE1 A:HIS236 4.9 66.1 1.0

Reference:

J.E.Ladner, V.Atanasova, Z.Dolezelova, J.F.Parsons. Structure and Activity of PA5508, A Hexameric Glutamine Synthetase Homologue. Biochemistry V. 51 10121 2012.
ISSN: ISSN 0006-2960
PubMed: 23234431
DOI: 10.1021/BI3014856
Page generated: Mon Dec 14 17:54:23 2020

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