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Magnesium in PDB 4jh1: Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing

Protein crystallography data

The structure of Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing, PDB code: 4jh1 was solved by M.K.Thompson, J.Harp, M.E.Keithly, K.Jagessar, P.D.Cook, R.N.Armstrong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 64.446, 68.201, 69.598, 90.00, 90.00, 90.00
R / Rfree (%) 13.3 / 18.8

Other elements in 4jh1:

The structure of Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing (pdb code 4jh1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing, PDB code: 4jh1:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4jh1

Go back to Magnesium Binding Sites List in 4jh1
Magnesium binding site 1 out of 2 in the Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg203

b:24.9
occ:1.00
O B:HOH441 1.9 25.5 1.0
O B:HOH440 2.0 35.2 1.0
O A:HOH412 2.0 23.7 1.0
O B:HOH442 2.0 22.3 1.0
O B:HOH443 2.1 33.0 1.0
O A:HOH413 2.2 37.5 1.0
OE2 B:GLU72 3.5 28.7 1.0
O B:HOH329 4.1 20.7 1.0
OD2 B:ASP75 4.1 19.2 1.0
OD1 A:ASN3 4.2 14.7 1.0
ND2 A:ASN3 4.3 15.0 1.0
CA A:MET1 4.6 14.0 1.0
CD B:GLU72 4.6 28.8 1.0
CG A:ASN3 4.7 12.2 1.0
NZ B:LYS74 4.9 26.1 1.0
O A:MET1 5.0 17.8 1.0

Magnesium binding site 2 out of 2 in 4jh1

Go back to Magnesium Binding Sites List in 4jh1
Magnesium binding site 2 out of 2 in the Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Fosb From Bacillus Cereus with Zinc and Sulfate at 1.55 A Resolution -Sad Phasing within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg204

b:20.6
occ:1.00
O B:HOH407 1.9 41.7 1.0
O B:HOH405 2.0 32.6 1.0
O B:HOH406 2.0 23.6 1.0
O B:HOH408 2.0 32.2 1.0
O B:HOH404 2.0 37.8 1.0
O B:HOH403 2.1 24.5 1.0
O B:ARG35 4.1 15.8 1.0
OE2 B:GLU16 4.1 35.1 1.0
OE1 B:GLU16 4.2 25.5 1.0
OE1 B:GLU51 4.2 14.1 1.0
OE2 B:GLU51 4.2 12.4 1.0
CD B:GLU16 4.6 33.4 1.0
CD B:GLU51 4.6 11.7 1.0

Reference:

M.K.Thompson, M.E.Keithly, J.Harp, P.D.Cook, K.L.Jagessar, G.A.Sulikowski, R.N.Armstrong. Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred By Fosb From Bacillus Cereus. Biochemistry V. 52 7350 2013.
ISSN: ISSN 0006-2960
PubMed: 24004181
DOI: 10.1021/BI4009648
Page generated: Mon Dec 14 18:56:21 2020

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