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Magnesium in PDB 4pjl: Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 -

Protein crystallography data

The structure of Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 -, PDB code: 4pjl was solved by T.Isabet, H.Benisty, P.Llinas, H.L.Sweeney, A.Houdusse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 91.180, 95.320, 104.020, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 - (pdb code 4pjl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 -, PDB code: 4pjl:

Magnesium binding site 1 out of 1 in 4pjl

Go back to Magnesium Binding Sites List in 4pjl
Magnesium binding site 1 out of 1 in the Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 -


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Myosin VI Motor Domain A458E Mutant in the Pi Release State, Space Group P212121 - within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg801

b:19.3
occ:1.00
O A:HOH962 2.0 15.5 1.0
OG1 A:THR158 2.1 19.9 1.0
O2B A:ADP802 2.1 21.9 1.0
O A:HOH964 2.1 18.4 1.0
O A:HOH961 2.1 14.2 1.0
OG A:SER204 2.1 19.5 1.0
CB A:THR158 3.1 20.4 1.0
PB A:ADP802 3.3 20.6 1.0
CB A:SER204 3.3 18.6 1.0
O3B A:ADP802 3.5 18.6 1.0
OE1 A:GLU458 3.7 62.7 1.0
N A:SER204 3.8 18.1 1.0
N A:THR158 4.0 17.9 1.0
O2A A:ADP802 4.1 18.1 1.0
CG2 A:THR158 4.1 17.7 1.0
CA A:THR158 4.1 16.8 1.0
CA A:SER204 4.1 16.8 1.0
OD2 A:ASP456 4.2 26.4 1.0
OD1 A:ASP456 4.2 24.3 1.0
O A:HOH963 4.2 33.3 1.0
O3A A:ADP802 4.3 17.7 1.0
O1B A:ADP802 4.4 18.4 1.0
O A:HOH973 4.4 22.7 1.0
O A:ASN202 4.6 19.8 1.0
PA A:ADP802 4.6 18.1 1.0
ND2 A:ASN200 4.7 15.9 1.0
CG A:ASP456 4.7 26.0 1.0
O1A A:ADP802 4.7 19.5 1.0
C A:SER203 4.8 21.6 1.0
O A:HOH1035 4.8 45.6 1.0
CD A:GLU458 4.8 61.2 1.0
CE A:LYS157 4.9 15.4 1.0

Reference:

P.Llinas, T.Isabet, L.Song, V.Ropars, B.Zong, H.Benisty, S.Sirigu, C.Morris, C.Kikuti, D.Safer, H.L.Sweeney, A.Houdusse. How Actin Initiates the Motor Activity of Myosin Dev.Cell V. 33 1 2015.
ISSN: ISSN 1534-5807
DOI: 10.1016/J.BPJ.2014.11.160
Page generated: Mon Dec 14 19:20:17 2020

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