Magnesium in PDB 4q04: Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium

The structure of Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium, PDB code: 4q04 was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.90
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	69.420, 69.420, 187.360, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 23.9

The structure of Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium (pdb code 4q04). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium, PDB code: 4q04:

Magnesium binding site 1 out of 1 in the Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:27.0 occ:1.00 O A:HOH511 1.7 29.5 1.0 OG A:SER65 2.0 20.7 1.0 OD1 A:ASP61 2.1 21.5 1.0 O A:HOH512 2.2 28.2 1.0 OD1 A:ASP63 2.3 31.0 1.0 CB A:SER65 3.1 20.9 1.0 CG A:ASP61 3.2 23.4 1.0 CG A:ASP63 3.3 30.9 1.0 O A:THR67 3.4 19.1 1.0 OG1 A:THR67 3.7 19.3 1.0 N A:SER65 3.7 22.2 1.0 OD2 A:ASP63 3.7 34.9 1.0 OD2 A:ASP61 3.9 22.2 1.0 CA A:SER65 4.0 21.1 1.0 CB A:ASP61 4.3 24.1 1.0 OE2 A:GLU72 4.3 26.7 1.0 C A:THR67 4.3 19.8 1.0 CA A:ASP61 4.3 25.9 1.0 OE1 A:GLU72 4.3 27.3 1.0 N A:THR67 4.5 18.6 1.0 N A:ASP63 4.6 27.0 1.0 C A:ASP61 4.6 27.1 1.0 N A:ARG64 4.6 26.0 1.0 CB A:ASP63 4.6 30.1 1.0 C A:SER65 4.6 19.9 1.0 N A:GLY66 4.7 19.2 1.0 C A:ASP63 4.7 27.8 1.0 CD A:GLU72 4.8 26.8 1.0 C A:ARG64 4.8 23.2 1.0 N A:ARG62 4.8 28.7 1.0 CA A:THR67 4.9 18.9 1.0 CB A:THR67 4.9 19.4 1.0 CA A:ASP63 4.9 28.1 1.0 OE2 A:GLU69 4.9 30.4 1.0

T.E.Edwards, J.Abendroth, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of URE3-Bp From Entomaeba Histolytica To Be Published.