Atomistry » Magnesium » PDB 4raq-4rjk » 4ri2
Atomistry »
  Magnesium »
    PDB 4raq-4rjk »
      4ri2 »

Magnesium in PDB 4ri2: Crystal Structure of the Photoprotective Protein Psbs From Spinach

Protein crystallography data

The structure of Crystal Structure of the Photoprotective Protein Psbs From Spinach, PDB code: 4ri2 was solved by M.Fan, M.Li, W.Chang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.80 / 2.35
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.999, 77.537, 93.184, 90.00, 90.00, 90.00
R / Rfree (%) 23 / 26.6

Other elements in 4ri2:

The structure of Crystal Structure of the Photoprotective Protein Psbs From Spinach also contains other interesting chemical elements:

Mercury (Hg) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Photoprotective Protein Psbs From Spinach (pdb code 4ri2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Photoprotective Protein Psbs From Spinach, PDB code: 4ri2:

Magnesium binding site 1 out of 1 in 4ri2

Go back to Magnesium Binding Sites List in 4ri2
Magnesium binding site 1 out of 1 in the Crystal Structure of the Photoprotective Protein Psbs From Spinach


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Photoprotective Protein Psbs From Spinach within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:0.2
occ:1.00
MG B:CLA301 0.0 0.2 1.0
NB B:CLA301 2.0 0.0 1.0
ND B:CLA301 2.0 97.8 1.0
NC B:CLA301 2.2 95.8 1.0
NA B:CLA301 2.3 0.3 1.0
C4D B:CLA301 2.9 0.7 1.0
C1B B:CLA301 3.0 0.4 1.0
C4B B:CLA301 3.0 95.4 1.0
C1D B:CLA301 3.1 85.8 1.0
C1C B:CLA301 3.2 90.7 1.0
C4C B:CLA301 3.2 91.4 1.0
C4A B:CLA301 3.2 0.7 1.0
C1A B:CLA301 3.2 0.9 1.0
CHB B:CLA301 3.5 0.1 1.0
CHA B:CLA301 3.5 0.1 1.0
CHC B:CLA301 3.6 89.2 1.0
CHD B:CLA301 3.6 83.4 1.0
CD1 B:LEU82 4.1 48.9 1.0
C3D B:CLA301 4.2 97.0 1.0
C1 B:CLA301 4.2 0.2 1.0
C2D B:CLA301 4.3 81.9 1.0
C2B B:CLA301 4.3 1.0 1.0
C3B B:CLA301 4.3 0.7 1.0
CB B:LEU82 4.3 38.4 1.0
C2C B:CLA301 4.5 86.1 1.0
C3C B:CLA301 4.5 85.4 1.0
C3A B:CLA301 4.5 0.3 1.0
C2A B:CLA301 4.6 0.8 1.0
CG B:LEU82 4.8 45.2 1.0
CMA B:CLA301 4.9 93.1 1.0
O2A B:CLA301 4.9 0.7 1.0
CBD B:CLA301 4.9 0.4 1.0
CGA B:CLA301 5.0 0.8 1.0

Reference:

M.Fan, M.Li, Z.Liu, P.Cao, X.Pan, H.Zhang, X.Zhao, J.Zhang, W.Chang. Crystal Structures of the Psbs Protein Essential For Photoprotection in Plants. Nat.Struct.Mol.Biol. V. 22 729 2015.
ISSN: ISSN 1545-9993
PubMed: 26258636
DOI: 10.1038/NSMB.3068
Page generated: Mon Dec 14 19:30:51 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy