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Magnesium in PDB 4rig: Chimeric Glycosyltransferase LANGT2S8AC

Protein crystallography data

The structure of Chimeric Glycosyltransferase LANGT2S8AC, PDB code: 4rig was solved by H.K.Tam, S.Gerhardt, B.Breit, A.Bechthold, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.01 / 1.90
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 52.943, 59.109, 63.111, 79.30, 71.72, 87.69
R / Rfree (%) 20.3 / 24.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Chimeric Glycosyltransferase LANGT2S8AC (pdb code 4rig). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Chimeric Glycosyltransferase LANGT2S8AC, PDB code: 4rig:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4rig

Go back to Magnesium Binding Sites List in 4rig
Magnesium binding site 1 out of 2 in the Chimeric Glycosyltransferase LANGT2S8AC


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Chimeric Glycosyltransferase LANGT2S8AC within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:32.3
occ:1.00
O A:HOH597 2.1 27.8 1.0
O A:HOH599 2.1 30.4 1.0
O A:HOH600 2.2 34.2 1.0
O A:HOH598 2.3 35.2 1.0
O A:HOH596 4.0 29.9 1.0

Magnesium binding site 2 out of 2 in 4rig

Go back to Magnesium Binding Sites List in 4rig
Magnesium binding site 2 out of 2 in the Chimeric Glycosyltransferase LANGT2S8AC


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Chimeric Glycosyltransferase LANGT2S8AC within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg400

b:36.7
occ:1.00
OD1 B:ASP150 2.0 31.6 1.0
O B:HOH565 2.1 28.3 1.0
O B:HOH564 2.1 30.3 1.0
O B:HOH567 2.2 26.5 1.0
O B:HOH566 2.2 25.8 1.0
O B:HOH539 2.2 24.8 1.0
CG B:ASP150 3.0 31.1 1.0
OD2 B:ASP150 3.3 31.4 1.0
O B:ASP150 3.9 28.7 1.0
CE1 B:HIS86 4.1 30.8 1.0
C B:ASP150 4.2 28.8 1.0
CB B:ASP150 4.3 29.4 1.0
N B:GLU151 4.6 27.8 1.0
O B:HOH568 4.6 27.1 1.0
CA B:GLU151 4.7 28.2 1.0
ND1 B:HIS86 4.8 30.1 1.0
CA B:ASP150 4.8 28.8 1.0
OE2 B:GLU151 4.9 31.4 1.0

Reference:

H.K.Tam, J.Harle, S.Gerhardt, J.Rohr, G.Wang, J.S.Thorson, A.Bigot, M.Lutterbeck, W.Seiche, B.Breit, A.Bechthold, O.Einsle. Structural Characterization of O- and C-Glycosylating Variants of the Landomycin Glycosyltransferase LANGT2. Angew.Chem.Int.Ed.Engl. 2015.
ISSN: ESSN 1521-3773
PubMed: 25581707
DOI: 10.1002/ANIE.201409792
Page generated: Tue Aug 20 03:08:00 2024

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