Magnesium in PDB 5c4m: Rhoa Gdp with Novel Switch II Conformation

The structure of Rhoa Gdp with Novel Switch II Conformation, PDB code: 5c4m was solved by E.Pellegrini, M.W.Bowler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.30 / 1.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	31.796, 66.271, 83.679, 90.00, 90.00, 90.00
R / Rfree (%)	17 / 20

The binding sites of Magnesium atom in the Rhoa Gdp with Novel Switch II Conformation (pdb code 5c4m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Rhoa Gdp with Novel Switch II Conformation, PDB code: 5c4m:

Magnesium binding site 1 out of 1 in the Rhoa Gdp with Novel Switch II Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rhoa Gdp with Novel Switch II Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:12.2 occ:1.00 O1B A:GDP202 2.1 12.1 1.0 O A:HOH312 2.1 12.1 1.0 O A:HOH311 2.1 13.6 1.0 OG1 A:THR19 2.1 12.5 1.0 O A:THR37 2.1 13.9 1.0 O A:HOH317 2.1 14.3 1.0 CB A:THR19 3.2 12.0 1.0 C A:THR37 3.3 13.3 1.0 PB A:GDP202 3.3 11.5 1.0 O3B A:GDP202 3.5 12.4 1.0 N A:THR19 4.0 10.7 1.0 O2A A:GDP202 4.1 12.9 1.0 CA A:THR37 4.1 13.8 1.0 O A:HOH455 4.1 27.8 1.0 O A:PRO36 4.1 14.9 1.0 OD2 A:ASP59 4.1 13.5 1.0 CA A:THR19 4.1 11.6 1.0 N A:VAL38 4.2 14.4 1.0 CG2 A:THR19 4.2 12.8 1.0 OD1 A:ASP59 4.3 12.6 1.0 CA A:VAL38 4.3 15.2 1.0 O3A A:GDP202 4.3 11.9 1.0 O2B A:GDP202 4.4 11.7 1.0 PA A:GDP202 4.6 12.2 1.0 O A:THR60 4.6 13.6 1.0 CG A:ASP59 4.6 13.1 1.0 CG2 A:THR37 4.8 16.6 1.0 O1A A:GDP202 4.8 12.8 1.0 CG1 A:VAL38 4.8 16.5 1.0 CB A:LYS18 5.0 11.2 1.0 O A:HOH315 5.0 21.1 1.0

E.Pellegrini, M.W.Bowler. Rhoa Gdp with Novel Switch II Conformation To Be Published.