Magnesium in PDB 5vvr: Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26

All present enzymatic activity of Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26:
2.7.7.6; 3.6.4.12;

The structure of Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26 also contains other interesting chemical elements:

Zinc

(Zn)

8 atoms

The binding sites of Magnesium atom in the Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26 (pdb code 5vvr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26, PDB code: 5vvr:

Magnesium binding site 1 out of 1 in the Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1803 b:30.0 occ:1.00 NH1 A:ARG446 3.0 96.0 1.0 CZ A:ARG446 3.3 0.1 1.0 NH2 A:ARG446 3.4 0.3 1.0 NE A:ARG446 4.1 0.1 1.0 O2' R:A10 4.3 0.7 1.0 C2' R:A10 4.5 0.9 1.0 CD A:PRO448 4.7 79.2 1.0 CD A:ARG446 4.8 96.0 1.0 O A:GLN447 4.8 95.2 1.0

J.Xu, I.Lahiri, W.Wang, A.Wier, M.A.Cianfrocco, J.Chong, A.A.Hare, P.B.Dervan, F.Dimaio, A.E.Leschziner, D.Wang. Structural Basis For the Initiation of Eukaryotic Transcription-Coupled Dna Repair. Nature V. 551 653 2017.
ISSN: ESSN 1476-4687
PubMed: 29168508
DOI: 10.1038/NATURE24658