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Magnesium in PDB, part 325 (files: 12961-13000), PDB 5xxt-5ycd

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 12961-13000 (PDB 5xxt-5ycd).
  1. 5xxt (Mg: 9) - Gdp-Microtubule Complexed with Nucleotide-Free KIF5C
  2. 5xxv (Mg: 9) - Gdp-Microtubule Complexed with KIF5C in Amppnp State
  3. 5xxw (Mg: 9) - Gdp-Microtubule Complexed with KIF5C in Atp State
  4. 5xxx (Mg: 18) - Gmpcpp-Microtubule Complexed with Nucleotide-Free KIF5C
  5. 5xym (Mg: 146) - Large Subunit of Mycobacterium Smegmatis
  6. 5xyu (Mg: 48) - Small Subunit of Mycobacterium Smegmatis Ribosome
  7. 5xz8 (Mg: 1) - Crystal Structure of Phosphofructokinase From Staphylococcus Aureus in Complex with Adenylylimidodiphosphate (the Atp Analog) and Fructose- 6-Phosphate
  8. 5y07 (Mg: 2) - Crystal Structure of Adenine Phosphoribosyltransferase From Yersinia Pseudotuberculosis with Prpp.
    Other atoms: Na (2);
  9. 5y19 (Mg: 2) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-((2S,3R)-3-Amino-2-Hydroxy-4-Phenylbutanamido)- N-Hydroxy- 4-Methylpentanamide.
    Other atoms: Zn (1);
  10. 5y1h (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2,4-Difluorobenzyl)Ureido)-N-Hydroxy-4- Methylpentanamide
    Other atoms: F (2); Zn (1);
  11. 5y1k (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2-Chlorobenzyl)Ureido)-N-Hydroxy-4-Methylpentanamide
    Other atoms: Cl (1); Zn (1);
  12. 5y1q (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(3-Chlorobenzyl)Ureido)-N-Hydroxy-4-Methylpentanamide
    Other atoms: Cl (1); Zn (1);
  13. 5y1r (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-N-Hydroxy-4-Methyl-2-(3-( O-Tolyl)Ureido)Pentanamide
    Other atoms: Zn (1);
  14. 5y1s (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(3,4-Dimethylbenzyl)Ureido)-N-Hydroxy-4- Methylpentanamide
    Other atoms: Zn (1);
  15. 5y1t (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2,3-Dimethylbenzyl)Ureido)-N-Hydroxy-4- Methylpentanamide
    Other atoms: Zn (1);
  16. 5y1v (Mg: 2) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-2-(3-(2,6-Diethylphenyl)Ureido)- N-Hydroxy-4- Methylpentanamide
    Other atoms: Zn (1);
  17. 5y1w (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N with Magnesium Bound to Active Site Zinc
    Other atoms: Zn (1);
  18. 5y1x (Mg: 1) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with Actinonin
    Other atoms: Zn (1);
  19. 5y34 (Mg: 2) - Membrane-Bound Respiratory [Nife]-Hydrogenase From Hydrogenovibrio Marinus in A Ferricyanide-Oxidized Condition
    Other atoms: Ni (2); Fe (26);
  20. 5y36 (Mg: 3) - Cryo-Em Structure of SPCAS9-Sgrna-Dna Ternary Complex
  21. 5y3i (Mg: 3) - Crystal Structure of Plasmodium Falciparum Aminopeptidase N in Complex with (S)-N-Hydroxy-4-Methyl-2-(3-(3-Methylbenzyl)Ureido)Pentanamide
    Other atoms: Zn (1);
  22. 5y3j (Mg: 2) - Crystal Structure of Horse TLR9 in Complex with Two Dnas (Cpg Dna and Tcgcac Dna)
  23. 5y41 (Mg: 1) - Crystal Structure of Ligand-Bound NURR1-Lbd
    Other atoms: Cl (2);
  24. 5y4i (Mg: 1) - Crystal Structure of Glucose Isomerase in Complex with Glycerol in One Metal Binding Mode
  25. 5y4j (Mg: 1) - Crystal Structure of Glucose Isomerase in Complex with Xylitol Inhibitor in One Metal Binding Mode
  26. 5y4n (Mg: 1) - Crystal Structure of Aerobically Purified and Anaerobically Crystallized D. Vulgaris Miyazaki F [Nife]-Hydrogenase
    Other atoms: Ni (1); Fe (12);
  27. 5y5p (Mg: 4) - Crystal Structure of the Dutpase of White Spot Syndrome Virus in Complex with Du,Ppi and MG2+
  28. 5y5q (Mg: 3) - Crystal Structure of the Wssv Dutpase D88N/R158E Mutant in Complex with Dutp
  29. 5y5s (Mg: 37) - Structure of Photosynthetic LH1-Rc Super-Complex at 1.9 Angstrom Resolution
    Other atoms: Fe (5); Ca (16);
  30. 5y6z (Mg: 1) - Crystal Structure of the Coxsackievirus A16 Polymerase Elongation Complex
  31. 5y85 (Mg: 26) - Structure-Based Insights Into Self-Cleavage By A Four-Way Junctional Twister-Sister Ribozyme
  32. 5y88 (Mg: 6) - Cryo-Em Structure of the Intron-Lariat Spliceosome Ready For Disassembly From S.Cerevisiae at 3.5 Angstrom
    Other atoms: Zn (6);
  33. 5y8b (Mg: 2) - Periplasmic Heme-Binding Protein Rhut From Roseiflexus Sp. Rs-1 in Apo Form
  34. 5y8h (Mg: 1) - Mycobacterium Tuberculosis 3-Hydroxyisobutyrate Dehydrogenase (Mthibadh) + Nad+
  35. 5y8v (Mg: 4) - Crystal Structure of GAS41
  36. 5y9e (Mg: 29) - Crystal Structure of HPV58 Pentamer
  37. 5y9z (Mg: 2) - Crystal Structure of Rat Hematopoietic Prostaglandin D Synthase
  38. 5ybh (Mg: 20) - Structural of the Highly Conserved Atpase From Type III Secretion System of Bacterial Pathogens
  39. 5ybi (Mg: 38) - Structure of the Bacterial Pathogens Atpase with Substrate Amppnp
  40. 5ycd (Mg: 2) - Crystal Structure of Poecilia Reticulata Adenylate Kinase
Page generated: Thu Dec 17 12:27:57 2020

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