Magnesium in PDB 6adu: Crystal Structure of An Enzyme in Complex with Ligand C

Protein crystallography data

The structure of Crystal Structure of An Enzyme in Complex with Ligand C, PDB code: 6adu was solved by X.K.Tan, W.D.Liu, C.C.Chen, R.T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.67 / 1.96
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 87.773, 256.546, 36.043, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 24.7

Other elements in 6adu:

The structure of Crystal Structure of An Enzyme in Complex with Ligand C also contains other interesting chemical elements:

Calcium (Ca) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Enzyme in Complex with Ligand C (pdb code 6adu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Enzyme in Complex with Ligand C, PDB code: 6adu:

Magnesium binding site 1 out of 1 in 6adu

Go back to Magnesium Binding Sites List in 6adu
Magnesium binding site 1 out of 1 in the Crystal Structure of An Enzyme in Complex with Ligand C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Enzyme in Complex with Ligand C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg305

b:35.5
occ:1.00
O A:HOH548 2.2 29.1 1.0
O A:ILE33 2.3 21.2 1.0
O A:HOH607 2.4 38.9 1.0
O A:HOH559 2.5 32.6 1.0
O A:HOH547 2.6 28.9 1.0
C A:ILE33 3.5 23.6 1.0
N A:ILE33 4.0 26.4 1.0
CB A:ALA36 4.3 22.1 1.0
CA A:ILE33 4.3 26.4 1.0
N A:ASN34 4.4 22.1 1.0
N A:ASN35 4.4 23.7 1.0
CA A:ASN34 4.5 24.3 1.0
O A:HOH617 4.5 45.9 1.0
N A:ALA36 4.6 23.1 1.0
C A:ASN34 4.7 25.0 1.0
O A:HOH563 4.7 32.0 1.0
O A:HOH516 4.8 30.1 1.0
O A:HOH595 4.8 37.6 1.0
CB A:ILE33 4.8 24.9 1.0
O A:HOH473 4.8 23.7 1.0

Reference:

X.K.Tan, W.D.Liu, C.C.Chen, R.T.Guo. Crystal Structure of An Enzyme in Complex with Ligand C To Be Published.
Page generated: Mon Dec 14 22:20:08 2020

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