Magnesium in PDB 6fl8: Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp

Enzymatic activity of Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp

Protein crystallography data

Other elements in 6fl8:

Magnesium Binding Sites:

Magnesium binding site 1 out of 3 in 6fl8

Magnesium Binding Sites List in 6fl8

Magnesium binding site 1 out of 3 in the Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg503 b:53.8 occ:1.00 O1B A:ADP502 2.2 44.4 1.0 O1A A:ADP502 2.3 45.6 1.0 OD2 A:ASP407 2.3 45.5 1.0 O A:HOH698 2.3 51.3 1.0 O A:HOH697 2.4 58.7 1.0 O A:HOH678 3.1 40.1 1.0 CG A:ASP407 3.3 46.2 1.0 PB A:ADP502 3.5 48.0 1.0 PA A:ADP502 3.5 42.6 1.0 O3A A:ADP502 3.7 38.6 1.0 HO14 A:TIY501 3.8 71.1 0.9 CB A:ASP407 4.0 37.8 1.0 H5'2 A:ADP502 4.1 48.8 1.0 O3B A:ADP502 4.1 44.7 1.0 OD1 A:ASP407 4.3 44.9 1.0 O2A A:ADP502 4.6 41.5 1.0 O14 A:TIY501 4.6 59.3 0.9 O5' A:ADP502 4.6 40.3 1.0 O2B A:ADP502 4.7 40.3 1.0 CA A:GLY19 4.8 46.1 1.0 H3' A:ADP502 4.8 44.4 1.0 O A:HOH710 4.8 51.9 1.0 O3' A:ADP502 4.9 41.6 1.0 HO16 A:TIY501 4.9 69.9 0.9 C5' A:ADP502 4.9 40.6 1.0 HO3' A:ADP502 4.9 50.0 1.0

Magnesium binding site 2 out of 3 in 6fl8

Magnesium Binding Sites List in 6fl8

Magnesium binding site 2 out of 3 in the Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg503 b:68.5 occ:1.00 OD1 B:ASP407 2.8 50.2 1.0 O2B B:ADP502 3.0 45.7 0.9 OG B:SER409 3.2 45.8 1.0 OD2 B:ASP407 3.4 50.8 1.0 CG B:ASP407 3.5 48.9 1.0 PB B:ADP502 3.9 41.7 0.9 O3B B:ADP502 4.0 44.0 0.9 CB B:ALA21 4.1 45.6 1.0 CB B:SER409 4.3 40.4 1.0 NZ B:LYS411 4.5 36.0 1.0 O1B B:ADP502 4.6 45.1 0.9 NH2 B:ARG40 4.7 37.4 1.0 MG B:MG504 4.9 49.4 1.0 N B:ALA21 5.0 50.8 1.0 CB B:ASP407 5.0 40.7 1.0

Magnesium binding site 3 out of 3 in 6fl8

Magnesium Binding Sites List in 6fl8

Magnesium binding site 3 out of 3 in the Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase From A. Thaliana in Complex with Purpurogallin and Adp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg504 b:49.4 occ:1.00 OD2 B:ASP407 2.1 50.8 1.0 O2A B:ADP502 2.3 43.2 0.9 O B:HOH672 2.3 48.1 1.0 O3B B:ADP502 2.4 44.0 0.9 O B:HOH654 2.5 46.8 1.0 O B:HOH647 2.8 43.0 1.0 CG B:ASP407 3.2 48.9 1.0 PA B:ADP502 3.7 40.6 0.9 CB B:ASP407 3.7 40.7 1.0 PB B:ADP502 3.7 41.7 0.9 H5'2 B:ADP502 4.0 42.4 0.9 O3A B:ADP502 4.1 39.1 0.9 OD1 B:ASP407 4.3 50.2 1.0 O2B B:ADP502 4.3 45.7 0.9 H3' B:ADP502 4.6 46.6 0.9 O5' B:ADP502 4.7 35.9 0.9 O1A B:ADP502 4.7 41.2 0.9 O3' B:ADP502 4.7 36.8 0.9 HO3' B:ADP502 4.7 44.2 0.9 OG B:SER370 4.7 39.3 1.0 C5' B:ADP502 4.9 35.3 0.9 O B:ASP368 4.9 35.2 1.0 MG B:MG503 4.9 68.5 1.0 O1B B:ADP502 4.9 45.1 0.9

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