Atomistry » Magnesium » PDB 7cu9-7d8g » 7cwz
Atomistry »
  Magnesium »
    PDB 7cu9-7d8g »
      7cwz »

Magnesium in PDB 7cwz: Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa

Enzymatic activity of Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa

All present enzymatic activity of Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa:
4.1.1.86;

Protein crystallography data

The structure of Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa, PDB code: 7cwz was solved by X.Yu, M.Gong, J.Huang, W.Liu, C.Chen, R.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.85 / 2.97
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 133.314, 133.314, 390.631, 90, 90, 120
R / Rfree (%) 24.3 / 29.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa (pdb code 7cwz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa, PDB code: 7cwz:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 7cwz

Go back to Magnesium Binding Sites List in 7cwz
Magnesium binding site 1 out of 2 in the Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg701

b:87.8
occ:1.00
OD1 A:ASP550 2.4 70.5 1.0
NE2 A:HIS548 2.5 84.4 1.0
NE2 A:HIS526 2.7 82.7 1.0
CD2 A:HIS548 3.1 88.0 1.0
CG A:ASP550 3.1 70.3 1.0
OD2 A:ASP550 3.2 76.4 1.0
CD2 A:HIS526 3.4 80.0 1.0
CE1 A:HIS548 3.7 84.1 1.0
CE1 A:HIS526 3.8 77.4 1.0
CG A:HIS548 4.4 80.5 1.0
CB A:ASP550 4.5 58.6 1.0
ND1 A:HIS548 4.6 80.7 1.0
CG A:HIS526 4.6 73.5 1.0
ND1 A:HIS526 4.7 73.4 1.0

Magnesium binding site 2 out of 2 in 7cwz

Go back to Magnesium Binding Sites List in 7cwz
Magnesium binding site 2 out of 2 in the Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:58.1
occ:1.00
NE2 B:HIS548 3.0 64.7 1.0
NE2 B:HIS526 3.1 75.2 1.0
OD1 B:ASP550 3.2 70.0 1.0
CD2 B:HIS526 3.5 65.3 1.0
CD2 B:HIS548 3.5 61.2 1.0
CG B:ASP550 3.6 61.3 1.0
CE1 B:HIS548 3.6 65.8 1.0
OD2 B:ASP550 3.8 64.5 1.0
CE1 B:HIS526 4.3 73.5 1.0
CG B:HIS548 4.4 58.1 1.0
ND1 B:HIS548 4.4 61.1 1.0
CB B:ASP550 4.5 54.6 1.0
CG B:HIS526 4.8 63.7 1.0
N B:ASP550 4.9 56.7 1.0

Reference:

X.Yu, M.Gong, J.Huang, W.Liu, C.Chen, R.Guo. Crystal Structure of A Tyrosine Decarboxylase From Enterococcus Faecalis K392A Mutant in Complex with the Cofactor Plp and L-Dopa To Be Published.
Page generated: Wed Oct 2 14:39:59 2024

Last articles

Mg in 1VPA
Mg in 1VPE
Mg in 1VOM
Mg in 1VMA
Mg in 1VMK
Mg in 1VM9
Mg in 1VCR
Mg in 1VLB
Mg in 1VKP
Mg in 1VL8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy