Magnesium in PDB 6igj: Crystal Structure of Ft Condition 4

Protein crystallography data

The structure of Crystal Structure of Ft Condition 4, PDB code: 6igj was solved by S.Watanabe, Y.Nakamura, K.Kanehara, K.Inaba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.32 / 1.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 53.503, 53.503, 103.975, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 22.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Ft Condition 4 (pdb code 6igj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Ft Condition 4, PDB code: 6igj:

Magnesium binding site 1 out of 1 in 6igj

Go back to Magnesium Binding Sites List in 6igj
Magnesium binding site 1 out of 1 in the Crystal Structure of Ft Condition 4


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Ft Condition 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:25.7
occ:1.00
OD1 A:ASN141 2.0 22.9 1.0
O A:HOH378 2.0 28.9 1.0
O A:HOH394 2.1 27.9 1.0
O A:HIS81 2.1 27.0 1.0
O A:HOH343 2.2 23.9 1.0
CG A:ASN141 3.0 23.6 1.0
C A:HIS81 3.3 33.9 1.0
HD21 A:ASN141 3.4 26.9 1.0
HA A:LEU82 3.4 28.7 1.0
ND2 A:ASN141 3.6 22.5 1.0
HA A:HIS81 3.9 34.4 1.0
HB2 A:HIS81 4.1 31.1 1.0
HB3 A:ASN141 4.1 26.1 1.0
N A:LEU82 4.1 24.4 1.0
CA A:LEU82 4.1 23.9 1.0
CA A:HIS81 4.1 28.6 1.0
CB A:ASN141 4.1 21.8 1.0
HA A:ASN141 4.3 22.3 1.0
HD23 A:LEU82 4.3 36.5 1.0
O A:ARG83 4.4 22.8 1.0
HD22 A:ASN141 4.4 26.9 1.0
H A:ARG83 4.5 26.1 1.0
C A:LEU82 4.5 18.9 1.0
CB A:HIS81 4.6 25.9 1.0
N A:ARG83 4.7 21.8 1.0
CA A:ASN141 4.8 18.6 1.0
HD2 A:HIS81 4.8 30.0 1.0
HB2 A:ASN141 4.9 26.1 1.0
H A:LEU82 4.9 29.3 1.0

Reference:

Y.Nakamura, Y.C.Lin, S.Watanabe, Y.C.Liu, K.Katsuyama, K.Kanehara, K.Inaba. High-Resolution Crystal Structure of Arabidopsis Flowering Locus T Illuminates Its Phospholipid-Binding Site in Flowering. Iscience V. 21 577 2019.
ISSN: ESSN 2589-0042
PubMed: 31726375
DOI: 10.1016/J.ISCI.2019.10.045
Page generated: Mon Dec 14 22:57:12 2020

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