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Magnesium in PDB 7xdw: Crystal Structure of A Receptor Like Kinase From Arabidopsis

Enzymatic activity of Crystal Structure of A Receptor Like Kinase From Arabidopsis

All present enzymatic activity of Crystal Structure of A Receptor Like Kinase From Arabidopsis:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of A Receptor Like Kinase From Arabidopsis, PDB code: 7xdw was solved by Y.Q.Kong, Z.H.Ming, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.71 / 1.93
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.805, 83.163, 62.048, 90, 93.14, 90
R / Rfree (%) 18.7 / 20.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Receptor Like Kinase From Arabidopsis (pdb code 7xdw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Receptor Like Kinase From Arabidopsis, PDB code: 7xdw:

Magnesium binding site 1 out of 1 in 7xdw

Go back to Magnesium Binding Sites List in 7xdw
Magnesium binding site 1 out of 1 in the Crystal Structure of A Receptor Like Kinase From Arabidopsis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Receptor Like Kinase From Arabidopsis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg902

b:121.7
occ:1.00
O2A A:ADP901 2.0 120.8 1.0
OD2 A:ASP679 2.2 86.1 1.0
O A:HOH1001 2.3 53.5 1.0
OD1 A:ASN666 2.3 38.1 1.0
CG A:ASP679 2.9 76.0 1.0
O2B A:ADP901 3.1 136.0 1.0
PA A:ADP901 3.1 111.1 1.0
O5' A:ADP901 3.3 100.4 1.0
OD1 A:ASP679 3.4 80.0 1.0
O1B A:ADP901 3.5 134.7 1.0
CG A:ASN666 3.5 33.9 1.0
O A:THR665 3.7 30.9 1.0
PB A:ADP901 3.7 130.2 1.0
O3A A:ADP901 3.9 121.4 1.0
CB A:ASP679 4.0 52.1 1.0
ND2 A:ASN666 4.2 30.3 1.0
C A:THR665 4.4 28.7 1.0
O1A A:ADP901 4.4 109.8 1.0
CA A:ASN666 4.6 22.6 1.0
OG1 A:THR665 4.6 31.9 1.0
CB A:ASN666 4.7 23.8 1.0
C5' A:ADP901 4.7 88.6 1.0
N A:ASN666 4.8 24.3 1.0
C3' A:ADP901 4.8 82.6 1.0
CB A:THR665 4.9 35.7 1.0
OG A:SER678 5.0 44.4 1.0

Reference:

Y.Q.Kong, J.Chen, H.Chen, Y.N.Shen, L.F.Wang, Y.J.Yan, H.P.Zheng, F.Yu, Z.H.Ming. The Structural and Biochemical Basis For Fer Receptor Kinase Early Signaling Initiation in Arabidopsis To Be Published.
Page generated: Thu Oct 3 12:22:26 2024

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