Magnesium in PDB 8ccn: Filamentous Actin II From Plasmodium Falciparum
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Filamentous Actin II From Plasmodium Falciparum
(pdb code 8ccn). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the
Filamentous Actin II From Plasmodium Falciparum, PDB code: 8ccn:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
Magnesium binding site 1 out
of 6 in 8ccn
Go back to
Magnesium Binding Sites List in 8ccn
Magnesium binding site 1 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:28.4
occ:1.00
|
O3B
|
A:ADP401
|
2.1
|
35.9
|
1.0
|
OE1
|
A:GLN137
|
3.4
|
44.9
|
1.0
|
PB
|
A:ADP401
|
3.6
|
35.9
|
1.0
|
CD
|
A:GLN137
|
4.1
|
44.9
|
1.0
|
OD1
|
A:ASP154
|
4.2
|
40.6
|
1.0
|
O2B
|
A:ADP401
|
4.3
|
35.9
|
1.0
|
O1B
|
A:ADP401
|
4.3
|
35.9
|
1.0
|
O2A
|
A:ADP401
|
4.4
|
35.9
|
1.0
|
NE2
|
A:GLN137
|
4.4
|
44.9
|
1.0
|
CA
|
A:GLY156
|
4.5
|
36.9
|
1.0
|
O3A
|
A:ADP401
|
4.5
|
35.9
|
1.0
|
OD2
|
A:ASP154
|
4.6
|
40.6
|
1.0
|
OD2
|
A:ASP11
|
4.7
|
44.2
|
1.0
|
CG2
|
A:VAL340
|
4.8
|
39.8
|
1.0
|
CG
|
A:ASP154
|
4.8
|
40.6
|
1.0
|
|
Magnesium binding site 2 out
of 6 in 8ccn
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Magnesium Binding Sites List in 8ccn
Magnesium binding site 2 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:27.0
occ:1.00
|
O3B
|
B:ADP401
|
2.1
|
40.3
|
1.0
|
OE1
|
B:GLN137
|
3.4
|
45.7
|
1.0
|
PB
|
B:ADP401
|
3.6
|
40.3
|
1.0
|
CD
|
B:GLN137
|
4.1
|
45.7
|
1.0
|
OD1
|
B:ASP154
|
4.2
|
35.7
|
1.0
|
O2B
|
B:ADP401
|
4.3
|
40.3
|
1.0
|
O1B
|
B:ADP401
|
4.3
|
40.3
|
1.0
|
O2A
|
B:ADP401
|
4.4
|
40.3
|
1.0
|
NE2
|
B:GLN137
|
4.4
|
45.7
|
1.0
|
CA
|
B:GLY156
|
4.5
|
34.1
|
1.0
|
O3A
|
B:ADP401
|
4.5
|
40.3
|
1.0
|
OD2
|
B:ASP154
|
4.6
|
35.7
|
1.0
|
OD2
|
B:ASP11
|
4.7
|
45.0
|
1.0
|
CG2
|
B:VAL340
|
4.8
|
38.8
|
1.0
|
CG
|
B:ASP154
|
4.8
|
35.7
|
1.0
|
|
Magnesium binding site 3 out
of 6 in 8ccn
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Magnesium Binding Sites List in 8ccn
Magnesium binding site 3 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg402
b:27.8
occ:1.00
|
O3B
|
C:ADP401
|
2.1
|
31.2
|
1.0
|
OE1
|
C:GLN137
|
3.4
|
45.2
|
1.0
|
PB
|
C:ADP401
|
3.6
|
31.2
|
1.0
|
CD
|
C:GLN137
|
4.1
|
45.2
|
1.0
|
OD1
|
C:ASP154
|
4.2
|
36.5
|
1.0
|
O2B
|
C:ADP401
|
4.3
|
31.2
|
1.0
|
O1B
|
C:ADP401
|
4.3
|
31.2
|
1.0
|
O2A
|
C:ADP401
|
4.3
|
31.2
|
1.0
|
NE2
|
C:GLN137
|
4.4
|
45.2
|
1.0
|
CA
|
C:GLY156
|
4.5
|
34.1
|
1.0
|
O3A
|
C:ADP401
|
4.5
|
31.2
|
1.0
|
OD2
|
C:ASP154
|
4.6
|
36.5
|
1.0
|
OD2
|
C:ASP11
|
4.7
|
43.2
|
1.0
|
CG2
|
C:VAL340
|
4.8
|
36.8
|
1.0
|
CG
|
C:ASP154
|
4.8
|
36.5
|
1.0
|
|
Magnesium binding site 4 out
of 6 in 8ccn
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Magnesium Binding Sites List in 8ccn
Magnesium binding site 4 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg402
b:28.3
occ:1.00
|
O3B
|
D:ADP401
|
2.1
|
38.5
|
1.0
|
OE1
|
D:GLN137
|
3.4
|
44.6
|
1.0
|
PB
|
D:ADP401
|
3.6
|
38.5
|
1.0
|
CD
|
D:GLN137
|
4.1
|
44.6
|
1.0
|
OD1
|
D:ASP154
|
4.2
|
36.8
|
1.0
|
O2B
|
D:ADP401
|
4.3
|
38.5
|
1.0
|
O1B
|
D:ADP401
|
4.3
|
38.5
|
1.0
|
O2A
|
D:ADP401
|
4.4
|
38.5
|
1.0
|
NE2
|
D:GLN137
|
4.4
|
44.6
|
1.0
|
CA
|
D:GLY156
|
4.5
|
34.3
|
1.0
|
O3A
|
D:ADP401
|
4.5
|
38.5
|
1.0
|
OD2
|
D:ASP154
|
4.6
|
36.8
|
1.0
|
OD2
|
D:ASP11
|
4.7
|
45.4
|
1.0
|
CG2
|
D:VAL340
|
4.8
|
35.8
|
1.0
|
CG
|
D:ASP154
|
4.8
|
36.8
|
1.0
|
|
Magnesium binding site 5 out
of 6 in 8ccn
Go back to
Magnesium Binding Sites List in 8ccn
Magnesium binding site 5 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg402
b:32.3
occ:1.00
|
O3B
|
E:ADP401
|
2.1
|
38.2
|
1.0
|
OE1
|
E:GLN137
|
3.4
|
45.4
|
1.0
|
PB
|
E:ADP401
|
3.6
|
38.2
|
1.0
|
CD
|
E:GLN137
|
4.1
|
45.4
|
1.0
|
OD1
|
E:ASP154
|
4.2
|
37.2
|
1.0
|
O2B
|
E:ADP401
|
4.3
|
38.2
|
1.0
|
O1B
|
E:ADP401
|
4.3
|
38.2
|
1.0
|
O2A
|
E:ADP401
|
4.4
|
38.2
|
1.0
|
NE2
|
E:GLN137
|
4.4
|
45.4
|
1.0
|
CA
|
E:GLY156
|
4.5
|
35.0
|
1.0
|
O3A
|
E:ADP401
|
4.5
|
38.2
|
1.0
|
OD2
|
E:ASP154
|
4.6
|
37.2
|
1.0
|
OD2
|
E:ASP11
|
4.7
|
44.9
|
1.0
|
CG2
|
E:VAL340
|
4.8
|
37.5
|
1.0
|
CG
|
E:ASP154
|
4.8
|
37.2
|
1.0
|
|
Magnesium binding site 6 out
of 6 in 8ccn
Go back to
Magnesium Binding Sites List in 8ccn
Magnesium binding site 6 out
of 6 in the Filamentous Actin II From Plasmodium Falciparum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg402
b:31.0
occ:1.00
|
O3B
|
F:ADP401
|
2.1
|
42.7
|
1.0
|
OE1
|
F:GLN137
|
3.4
|
47.1
|
1.0
|
PB
|
F:ADP401
|
3.6
|
42.7
|
1.0
|
CD
|
F:GLN137
|
4.1
|
47.1
|
1.0
|
OD1
|
F:ASP154
|
4.2
|
39.3
|
1.0
|
O2B
|
F:ADP401
|
4.3
|
42.7
|
1.0
|
O1B
|
F:ADP401
|
4.3
|
42.7
|
1.0
|
O2A
|
F:ADP401
|
4.4
|
42.7
|
1.0
|
NE2
|
F:GLN137
|
4.4
|
47.1
|
1.0
|
CA
|
F:GLY156
|
4.5
|
36.0
|
1.0
|
O3A
|
F:ADP401
|
4.5
|
42.7
|
1.0
|
OD2
|
F:ASP154
|
4.6
|
39.3
|
1.0
|
OD2
|
F:ASP11
|
4.7
|
48.7
|
1.0
|
CG2
|
F:VAL340
|
4.8
|
40.9
|
1.0
|
CG
|
F:ASP154
|
4.8
|
39.3
|
1.0
|
|
Reference:
A.J.Lopez,
M.Andreadaki,
J.Vahokoski,
E.Deligianni,
L.J.Calder,
S.Camerini,
A.Freitag,
U.Bergmann,
P.B.Rosenthal,
I.Siden-Kiamos,
I.Kursula.
Structure and Function of Plasmodium Actin II in the Parasite Mosquito Stages To Be Published.
Page generated: Thu Oct 3 20:35:07 2024
|