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Magnesium in PDB, part 515 (files: 20561-20600), PDB 8csz-8dbe

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 20561-20600 (PDB 8csz-8dbe).
  1. 8csz (Mg: 2) - Iscb and Wrna Bound to Target Dna
    Other atoms: Zn (1);
  2. 8cvm (Mg: 305) - Cutibacterium Acnes 50S Ribosomal Subunit with P-Site Trna and Sarecycline Bound in the Local Refined Map
    Other atoms: Zn (4);
  3. 8cvo (Mg: 12) - Cutibacterium Acnes 30S Ribosomal Subunit with Sarecycline Bound, Head Domain Only in the Local Refined Map
    Other atoms: Zn (1);
  4. 8cwi (Mg: 2) - Fab Arm of Antibody 10G4 Bound to Cov-2 Receptor Binding Domain (Rbd)
    Other atoms: Cl (3);
  5. 8cwo (Mg: 66) - Cutibacterium Acnes 30S Ribosomal Subunit with Sarecycline Bound, Body Domain Only in the Local Refined Map
  6. 8cx5 (Mg: 2) - Crystal Structure of Small Molecule Alpha,Beta-Ketoamide 4 Covalently Bound to K-Ras(G12R)
    Other atoms: Cl (2); F (2); Na (1);
  7. 8cxl (Mg: 2) - Structure of NAPH3, A Vanadium-Dependent Haloperoxidase Homolog Catalyzing the Stereospecific Alpha-Hydroxyketone Rearrangement Reaction in Napyradiomycin Biosynthesis
    Other atoms: Cl (1);
  8. 8d13 (Mg: 3) - Helical Adp-F-Actin
  9. 8d14 (Mg: 3) - Helical Adp-Pi-F-Actin
  10. 8d15 (Mg: 7) - Bent Adp-F-Actin
  11. 8d16 (Mg: 7) - Bent Adp-Pi-F-Actin
  12. 8d17 (Mg: 7) - Straight Adp-F-Actin 1
  13. 8d18 (Mg: 7) - Straight Adp-F-Actin 2
  14. 8d28 (Mg: 5) - Crystal Structure of Theophylline Aptamer in Complex with Theophylline
    Other atoms: Na (4);
  15. 8d2a (Mg: 2) - Crystal Structure of Theophylline Aptamer in Complex with TAL3
    Other atoms: Na (4);
  16. 8d2b (Mg: 5) - Crystal Structure of Theophylline Aptamer in Complex with TAL2
    Other atoms: Na (4);
  17. 8d2k (Mg: 10) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Cleavage Intermediate 2)
  18. 8d2l (Mg: 10) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Cleavage Intermediate 1)
  19. 8d2n (Mg: 1) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Pre- Cleavage)
  20. 8d2o (Mg: 5) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Post- Cleavage 2)
  21. 8d2p (Mg: 10) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Target Bound)
  22. 8d2q (Mg: 5) - Structure of Acidothermus Cellulolyticus CAS9 Ternary Complex (Post- Cleavage 1)
  23. 8d32 (Mg: 2) - Mycobacterium Tuberculosis Pduo-Type Atp:Cobalamin Adenosyltransferase Bound to 5-Deoxyadenosylrhodibalamin and Pppi
    Other atoms: Rh (1);
  24. 8d39 (Mg: 2) - The Crystal Structure of Wt CYP199A4 Bound to 4-Benzoylbenzoic Acid
    Other atoms: Cl (1); Fe (1);
  25. 8d3x (Mg: 1) - Human ALPHA3 Na+/K+-Atpase in Its K+-Occluded State
    Other atoms: F (4);
  26. 8d4a (Mg: 2) - CAS12A2 Quaternary Complex
    Other atoms: Zn (1);
  27. 8d4t (Mg: 1) - Mammalian Civ with Gdn Bound
    Other atoms: Na (1); Zn (1); Cu (3); Fe (2);
  28. 8d5l (Mg: 6) - Crystal Structure of Theophylline Aptamer in Complex with TAL1
    Other atoms: Na (4); Ca (5);
  29. 8d6j (Mg: 1) - Human AGO2 Bound to MIR122(21NT) with Piwi Loop Swapped to ATAGO10 Sequence
  30. 8d71 (Mg: 1) - Human AGO2 Bound to MIR122(21NT)
  31. 8d86 (Mg: 5) - Isoreticular, Interpenetrating Co-Crystal of Replication Initiator Protein REPE54 and Symmetrical Expanded Duplex (31MER) Containing the Cognate REPE54 Sequence and An Additional G-C Rich Sequence Co- Crystallized with A Guest Small Molecule, Netropsin.
  32. 8d8j (Mg: 29) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 1)
    Other atoms: Fe (4);
  33. 8d8k (Mg: 72) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 2)
    Other atoms: Fe (4);
  34. 8d8l (Mg: 72) - Yeast Mitochondrial Small Subunit Assembly Intermediate (State 3)
    Other atoms: Fe (4);
  35. 8d96 (Mg: 1) - Human Dna Polymerase Alpha/Primase Elongation Complex I Bound to Primer/Template
    Other atoms: Fe (4);
  36. 8d9d (Mg: 2) - Human Dna Polymerase-Alpha/Primase Elongation Complex II Bound to Primer/Template
    Other atoms: Fe (4); Zn (3);
  37. 8d9r (Mg: 18) - Ap-1, ARF1, Nef Lattice on Mhc-I Lipopeptide Incorporated Wide Membrane Tubes, Centered on Gamma-ARF1
  38. 8d9s (Mg: 18) - Ap-1, ARF1, Nef Lattice on Mhc-I Lipopeptide Incorporated Wide Membrane Tubes, Centered on Beta-ARF1
  39. 8dba (Mg: 23) - Crystal Structure of Dodecameric Kaic
  40. 8dbe (Mg: 12) - Human PRPS1 with Adp; Hexamer
Page generated: Thu Dec 28 08:58:40 2023

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