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Magnesium in PDB 8cco: Jas-Stabilized F-Actinii From Plasmodium Falciparum

Other elements in 8cco:

The structure of Jas-Stabilized F-Actinii From Plasmodium Falciparum also contains other interesting chemical elements:

Bromine (Br) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Jas-Stabilized F-Actinii From Plasmodium Falciparum (pdb code 8cco). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the Jas-Stabilized F-Actinii From Plasmodium Falciparum, PDB code: 8cco:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 1 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:22.8
occ:1.00
O2B A:ADP402 2.0 25.5 1.0
PB A:ADP402 3.5 25.5 1.0
OE1 A:GLN137 3.8 33.2 1.0
OD1 A:ASP154 4.0 29.1 1.0
O3B A:ADP402 4.0 25.5 1.0
O2A A:ADP402 4.1 25.5 1.0
O3A A:ADP402 4.3 25.5 1.0
CD A:GLN137 4.4 33.2 1.0
O1B A:ADP402 4.5 25.5 1.0
OD2 A:ASP154 4.6 29.1 1.0
NE2 A:GLN137 4.6 33.2 1.0
CA A:GLY156 4.6 27.8 1.0
OD2 A:ASP11 4.6 30.5 1.0
CG A:ASP154 4.7 29.1 1.0
PA A:ADP402 4.9 25.5 1.0

Magnesium binding site 2 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 2 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg403

b:19.9
occ:1.00
O2B B:ADP402 2.0 25.6 1.0
PB B:ADP402 3.5 25.6 1.0
OE1 B:GLN137 3.8 30.4 1.0
OD1 B:ASP154 4.0 26.6 1.0
O3B B:ADP402 4.0 25.6 1.0
O2A B:ADP402 4.1 25.6 1.0
O3A B:ADP402 4.3 25.6 1.0
CD B:GLN137 4.4 30.4 1.0
O1B B:ADP402 4.5 25.6 1.0
OD2 B:ASP154 4.6 26.6 1.0
NE2 B:GLN137 4.6 30.4 1.0
CA B:GLY156 4.6 26.5 1.0
OD2 B:ASP11 4.6 29.2 1.0
CG B:ASP154 4.7 26.6 1.0
PA B:ADP402 4.9 25.6 1.0

Magnesium binding site 3 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 3 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg403

b:21.9
occ:1.00
O2B C:ADP402 2.0 22.5 1.0
PB C:ADP402 3.5 22.5 1.0
OE1 C:GLN137 3.8 31.1 1.0
OD1 C:ASP154 4.0 25.4 1.0
O3B C:ADP402 4.0 22.5 1.0
O2A C:ADP402 4.1 22.5 1.0
O3A C:ADP402 4.3 22.5 1.0
CD C:GLN137 4.4 31.1 1.0
O1B C:ADP402 4.5 22.5 1.0
OD2 C:ASP154 4.6 25.4 1.0
NE2 C:GLN137 4.6 31.1 1.0
CA C:GLY156 4.6 25.2 1.0
OD2 C:ASP11 4.6 27.5 1.0
CG C:ASP154 4.7 25.4 1.0
PA C:ADP402 4.9 22.5 1.0

Magnesium binding site 4 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 4 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg403

b:25.4
occ:1.00
O2B D:ADP402 2.0 24.7 1.0
PB D:ADP402 3.5 24.7 1.0
OE1 D:GLN137 3.8 33.8 1.0
OD1 D:ASP154 4.0 29.9 1.0
O3B D:ADP402 4.0 24.7 1.0
O2A D:ADP402 4.1 24.7 1.0
O3A D:ADP402 4.3 24.7 1.0
CD D:GLN137 4.4 33.8 1.0
O1B D:ADP402 4.5 24.7 1.0
OD2 D:ASP154 4.6 29.9 1.0
NE2 D:GLN137 4.6 33.8 1.0
CA D:GLY156 4.6 28.3 1.0
OD2 D:ASP11 4.6 30.9 1.0
CG D:ASP154 4.7 29.9 1.0
PA D:ADP402 4.9 24.7 1.0

Magnesium binding site 5 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 5 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg403

b:24.4
occ:1.00
O2B E:ADP402 2.0 29.6 1.0
PB E:ADP402 3.5 29.6 1.0
OE1 E:GLN137 3.8 35.2 1.0
OD1 E:ASP154 4.0 33.3 1.0
O3B E:ADP402 4.0 29.6 1.0
O2A E:ADP402 4.1 29.6 1.0
O3A E:ADP402 4.3 29.6 1.0
CD E:GLN137 4.4 35.2 1.0
O1B E:ADP402 4.5 29.6 1.0
OD2 E:ASP154 4.6 33.3 1.0
NE2 E:GLN137 4.6 35.2 1.0
CA E:GLY156 4.6 30.5 1.0
OD2 E:ASP11 4.6 33.7 1.0
CG E:ASP154 4.7 33.3 1.0
PA E:ADP402 4.9 29.6 1.0

Magnesium binding site 6 out of 6 in 8cco

Go back to Magnesium Binding Sites List in 8cco
Magnesium binding site 6 out of 6 in the Jas-Stabilized F-Actinii From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Jas-Stabilized F-Actinii From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg403

b:29.2
occ:1.00
O2B F:ADP402 2.0 32.9 1.0
PB F:ADP402 3.5 32.9 1.0
OE1 F:GLN137 3.8 34.7 1.0
OD1 F:ASP154 4.0 31.9 1.0
O3B F:ADP402 4.0 32.9 1.0
O2A F:ADP402 4.1 32.9 1.0
O3A F:ADP402 4.3 32.9 1.0
CD F:GLN137 4.4 34.7 1.0
O1B F:ADP402 4.5 32.9 1.0
OD2 F:ASP154 4.6 31.9 1.0
NE2 F:GLN137 4.6 34.7 1.0
CA F:GLY156 4.6 31.9 1.0
OD2 F:ASP11 4.6 34.1 1.0
CG F:ASP154 4.7 31.9 1.0
PA F:ADP402 4.9 32.9 1.0

Reference:

A.J.Lopez, M.Andreadaki, J.Vahokoski, E.Deligianni, L.J.Calder, S.Camerini, A.Freitag, U.Bergmann, P.B.Rosenthal, I.Siden-Kiamos, I.Kursula. Structure and Function of Plasmodium Actin II in the Parasite Mosquito Stages To Be Published.
Page generated: Thu Oct 3 20:35:41 2024

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