Magnesium in PDB 8f2w: Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3

The structure of Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3, PDB code: 8f2w was solved by E.N.Ogbonna, W.D.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.29 / 1.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	25.58, 40.104, 66.099, 90, 90, 90
R / Rfree (%)	18.7 / 21.5

The binding sites of Magnesium atom in the Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3 (pdb code 8f2w). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3, PDB code: 8f2w:

Magnesium binding site 1 out of 1 in the Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A B-Form Dodecamer: 5'-Cgcgaattcgcg-3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg101 b:14.4 occ:1.00 O B:HOH233 2.0 16.5 1.0 O B:HOH221 2.1 15.0 1.0 O B:HOH225 2.1 15.3 1.0 H3' B:DA6 4.0 16.1 1.0 O B:HOH256 4.2 19.8 1.0 O B:HOH257 4.2 20.9 1.0 OP1 B:DA6 4.3 19.5 1.0 O B:HOH224 4.4 16.2 1.0 OP2 B:DT7 4.4 14.2 1.0 OP2 B:DA6 4.5 18.4 1.0 P B:DA6 4.6 17.9 1.0 O5' B:DA6 4.7 16.8 1.0 H5'' B:DA6 4.9 20.6 1.0 C3' B:DA6 4.9 13.4 1.0

E.N.Ogbonna, A.Paul, A.Faharat, J.R.Terrell, V.Ogbonna, D.W.Boykin, W.D.Wilson. X-Ray Structure Characterization of the Selective Recognition of at Base Pair Sequences Acs Bio Med Chem Au 2023.
ISSN: ESSN 2694-2437