Magnesium in PDB 8f2y: Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3

The structure of Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3, PDB code: 8f2y was solved by E.N.Ogbonna, W.D.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	25.71 / 1.78
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	25.486, 40.362, 66.692, 90, 90, 90
R / Rfree (%)	20.9 / 22.5

The binding sites of Magnesium atom in the Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3 (pdb code 8f2y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3, PDB code: 8f2y:

Magnesium binding site 1 out of 1 in the Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of An Alternating at Dodecamer: 5'-Cgcgatatcgcg-3 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg101 b:20.5 occ:1.00 O B:HOH208 2.0 21.5 1.0 O B:HOH221 2.0 19.8 1.0 O C:HOH111 2.2 22.5 1.0 H5 B:DC1 4.0 23.8 1.0 O C:HOH123 4.1 22.2 1.0 O6 B:DG2 4.3 20.0 1.0 O C:HOH121 4.3 20.2 1.0 O6 C:DG22 4.3 16.4 1.0 N7 B:DG2 4.4 19.4 1.0 O B:HOH237 4.4 35.8 1.0 C5 B:DC1 4.4 19.8 1.0 H6 B:DC1 4.7 25.2 1.0 C6 B:DC1 4.8 21.0 1.0 H42 B:DC3 5.0 25.1 1.0 H41 B:DC1 5.0 25.2 1.0

E.N.Ogbonna, A.Paul, A.Faharat, J.R.Terrell, V.Ogbonna, D.W.Boykin, W.D.Wilson. X-Ray Structure Characterization of the Selective Recognition of at Base Pair Sequences Acs Bio Med Chem Au 2023.
ISSN: ESSN 2694-2437