Magnesium in PDB 8f5b: Human ABCA4 Structure in Complex with Amp-Pnp

All present enzymatic activity of Human ABCA4 Structure in Complex with Amp-Pnp:
7.6.2.1;

The binding sites of Magnesium atom in the Human ABCA4 Structure in Complex with Amp-Pnp (pdb code 8f5b). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Human ABCA4 Structure in Complex with Amp-Pnp, PDB code: 8f5b:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Human ABCA4 Structure in Complex with Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human ABCA4 Structure in Complex with Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2307 b:165.5 occ:1.00 O1G A:ANP2305 2.0 197.4 1.0 OE1 A:GLN2019 2.0 132.0 1.0 N3B A:ANP2305 2.1 197.4 1.0 OG1 A:THR1979 2.2 152.8 1.0 PB A:ANP2305 2.4 197.4 1.0 PG A:ANP2305 2.5 197.4 1.0 O1B A:ANP2305 2.5 197.4 1.0 O2B A:ANP2305 2.6 197.4 1.0 CB A:THR1979 2.9 152.8 1.0 CD A:GLN2019 3.0 132.0 1.0 NE2 A:GLN2019 3.3 132.0 1.0 O2G A:ANP2305 3.6 197.4 1.0 O3G A:ANP2305 3.7 197.4 1.0 CG2 A:THR1979 3.9 152.8 1.0 O3A A:ANP2305 3.9 197.4 1.0 N A:THR1979 4.0 152.8 1.0 CA A:THR1979 4.1 152.8 1.0 CG A:GLN2019 4.3 132.0 1.0 O2A A:ANP2305 4.4 197.4 1.0 CG A:LYS1978 4.6 170.0 1.0 CB A:GLN2019 4.7 132.0 1.0 PA A:ANP2305 4.9 197.4 1.0 CB A:SER1063 4.9 184.8 1.0

Magnesium binding site 2 out of 2 in the Human ABCA4 Structure in Complex with Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human ABCA4 Structure in Complex with Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2308 b:163.8 occ:1.00 N3B A:ANP2304 2.0 170.5 1.0 OG1 A:THR970 2.0 151.8 1.0 O2A A:ANP2304 2.0 170.5 1.0 O2B A:ANP2304 2.1 170.5 1.0 NE2 A:GLN1010 2.1 150.2 1.0 OE1 A:GLN1010 2.3 150.2 1.0 PB A:ANP2304 2.5 170.5 1.0 CD A:GLN1010 2.5 150.2 1.0 O1G A:ANP2304 2.9 170.5 1.0 PG A:ANP2304 3.0 170.5 1.0 PA A:ANP2304 3.2 170.5 1.0 O3A A:ANP2304 3.3 170.5 1.0 CB A:THR970 3.3 151.8 1.0 O1B A:ANP2304 3.8 170.5 1.0 CG A:GLN1010 4.0 150.2 1.0 O3G A:ANP2304 4.0 170.5 1.0 N A:THR970 4.1 159.7 1.0 CG2 A:THR970 4.2 151.8 1.0 O2G A:ANP2304 4.2 170.5 1.0 O1A A:ANP2304 4.2 170.5 1.0 O5' A:ANP2304 4.3 170.5 1.0 CA A:THR970 4.3 159.7 1.0 CB A:GLN1010 4.6 150.2 1.0

J.F.Scortecci, F.A.Garces, L.L.Molday, F.Van Petegem, R.S.Molday. Structural and Functional Characterization of ABCA4 in Its Nucleotide-Bound State To Be Published.