Atomistry » Magnesium » PDB 8rik-8rpj » 8rix
Atomistry »
  Magnesium »
    PDB 8rik-8rpj »
      8rix »

Magnesium in PDB 8rix: Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp

Protein crystallography data

The structure of Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp, PDB code: 8rix was solved by L.Czech, G.Bange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.64 / 1.99
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 138.28, 37.07, 59.82, 90, 110.63, 90
R / Rfree (%) 21.9 / 27.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp (pdb code 8rix). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp, PDB code: 8rix:

Magnesium binding site 1 out of 1 in 8rix

Go back to Magnesium Binding Sites List in 8rix
Magnesium binding site 1 out of 1 in the Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:30.7
occ:1.00
O A:HOH539 2.0 28.9 1.0
O A:HOH526 2.1 29.6 1.0
O A:HOH516 2.1 29.7 1.0
O2B A:G4P401 2.1 28.4 1.0
OG1 A:THR178 2.1 26.9 1.0
O A:HOH536 2.3 32.8 1.0
PB A:G4P401 3.2 27.1 1.0
CB A:THR178 3.3 28.0 1.0
O1B A:G4P401 3.4 29.3 1.0
OD2 A:ASP201 3.9 41.3 1.0
N A:THR178 3.9 24.5 1.0
OD2 A:ASP254 3.9 30.7 1.0
OE1 A:GLN210 4.0 46.6 1.0
O A:HOH506 4.0 35.1 1.0
O2A A:G4P401 4.1 36.0 1.0
CA A:THR178 4.2 25.9 1.0
O3B A:G4P401 4.2 28.0 1.0
OD1 A:ASP254 4.3 32.2 1.0
CG2 A:THR178 4.3 32.5 1.0
O3A A:G4P401 4.3 27.5 1.0
CG A:ASP254 4.5 32.3 1.0
PA A:G4P401 4.5 28.0 1.0
CE A:LYS177 4.6 28.6 1.0
OD1 A:ASN173 4.6 34.4 1.0
NZ A:LYS177 4.6 31.7 1.0
O1A A:G4P401 4.6 31.5 1.0
CB A:LYS177 4.7 24.8 1.0
CD A:GLN210 4.9 44.3 1.0
CG A:ASP201 4.9 41.4 1.0

Reference:

L.Czech, G.Bange. Structure of Chloroplast Ftsy From Arabidopsis Thaliana in Complex with the Alarmone Ppgpp To Be Published.
Page generated: Sat Feb 8 20:43:48 2025

Last articles

Zn in 7G3K
Zn in 7G3B
Zn in 7G3H
Zn in 7G3D
Zn in 7G3G
Zn in 7G3L
Zn in 7G3N
Zn in 7G3M
Zn in 7G3E
Zn in 7G3F
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy