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Magnesium in PDB, part 354 (files: 14121-14160), PDB 6dp6-6dw5

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 14121-14160 (PDB 6dp6-6dw5).
  1. 6dp6 (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 80 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
    Other atoms: K (3); I (4);
  2. 6dp8 (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 5 Mm MG2+ and 200 Mm Li+ For 240 S at 21 C
    Other atoms: Cl (3);
  3. 6dph (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MN2+ and 200 Mm K+ For 120 S at 21 C
    Other atoms: K (3); I (4);
  4. 6dpi (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 40 S at 21 C
    Other atoms: Rb (3); Cl (3);
  5. 6dpl (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 720 S at 21 C
    Other atoms: Rb (6); Cl (3);
  6. 6dpm (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 1800 S at 21 C
    Other atoms: Rb (6); Cl (3);
  7. 6dpn (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MG2+ and 200 Mm K+ For 200 S at 21 C
    Other atoms: K (2); I (4);
  8. 6dpo (Mg: 3) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MG2+ and 200 Mm K+ For 360 S at 21 C
    Other atoms: K (1); I (4);
  9. 6dpp (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 5 Mm MG2+ and 200 Mm Rb+ For 240 S at 21 C
    Other atoms: Rb (5); Cl (3);
  10. 6dpu (Mg: 12) - Undecorated Gmpcpp Microtubule
  11. 6dpv (Mg: 6) - Undecorated Gdp Microtubule
  12. 6dpw (Mg: 6) - Undecorated Gtpgammas Microtubule
  13. 6dqx (Mg: 2) - Actinobacillus Ureae Class Id Ribonucleotide Reductase Alpha Subunit
    Other atoms: Cl (2);
  14. 6dre (Mg: 1) - Adp-Ribosyltransferase Toxin/Immunity Pair
  15. 6drh (Mg: 1) - Adp-Ribosyltransferase Toxin/Immunity Pair
  16. 6ds1 (Mg: 4) - Crystal Structure of CJ0485 Dehydrogenase in Complex with Nadp+
  17. 6dsu (Mg: 1) - Bst Dna Polymerase I Pre-Insertion Complex Structure
  18. 6dsv (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+2) Structure
  19. 6dsw (Mg: 1) - Bst Dna Polymerase I Pre-Chemistry (N) Structure
  20. 6dsx (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+1 with Datp Soak) Structure
  21. 6dsy (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+1) Structure
  22. 6dt1 (Mg: 1) - Crystal Structure of the Ligase From Bacteriophage T4 Complexed with Dna Intermediate
    Other atoms: Cl (2);
  23. 6dta (Mg: 3) - Bacteriophage N4 Rna Polymerase II Elongation Complex 2
  24. 6dti (Mg: 94) - Structure of the Thermus Thermophilus 30S Ribosomal Subunit Complexed with An Unmodifed Anticodon Stem Loop (Asl) of Escherichia Coli Transfer Rna Arginine 2 (TRNAARG2) Bound to An Mrna with An Cgu-Codon in the A-Site and Paromomycin
  25. 6dtq (Mg: 4) - Maltose Bound T. Maritima MALE3
  26. 6dtw (Mg: 1) - Hiv-1 Reverse Transcriptase Y181C Mutant in Complex with Jlj 578
    Other atoms: F (2);
  27. 6du2 (Mg: 2) - Structure of SCP1 D96N Bound to Rest-PS861/4 Peptide
  28. 6du3 (Mg: 2) - Structure of SCP1 D96N Bound to Rest-PS861/4 Peptide
  29. 6due (Mg: 1) - Toxoplasma Gondii Myoa, A Class-Xiv Myosin, in the Pre-Powerstroke State
    Other atoms: F (4); Al (1);
  30. 6duf (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase V106A/F227L Mutant in Complex with Non-Nucleoside Inhibitor 25A
  31. 6dug (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase K101P Mutant in Complex with Non-Nucleoside Inhibitor 25A
  32. 6duh (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase Y181I Mutant in Complex with Non-Nucleoside Inhibitor 25A
  33. 6duk (Mg: 6) - Egfr with An Allosteric Inhibitor
    Other atoms: F (6);
  34. 6duq (Mg: 12) - Structure of A Rho-Nusg Kow Domain Complex
    Other atoms: F (36);
  35. 6dus (Mg: 2) - Structure of Salmonella Effector SSEK3 E258Q Mutant
  36. 6dv9 (Mg: 1) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) Containing 5NT Rna with 4NT Spacer
    Other atoms: Zn (2);
  37. 6dvk (Mg: 5) - Computationally Designed Mini Tetraloop-Tetraloop Receptor By the Rnamake Program - Construct 6 (Minittr 6)
    Other atoms: Co (4);
  38. 6dw3 (Mg: 8) - SAMHD1 Bound to Cytarabine-Tp in the Catalytic Pocket
  39. 6dw4 (Mg: 8) - SAMHD1 Bound to Cladribine-Tp in the Catalytic Pocket and Allosteric Pocket
    Other atoms: Na (1);
  40. 6dw5 (Mg: 10) - SAMHD1 Bound to Gemcitabine-Tp in the Catalytic Pocket
    Other atoms: F (8); Ni (1); Na (4);
Page generated: Tue Feb 25 10:36:11 2025

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