Magnesium in PDB, part 354 (files: 14121-14160),
PDB 6dp8-6dw7
Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Magnesium atoms. PDB files: 14121-14160 (PDB 6dp8-6dw7).
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6dp8 (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 5 Mm MG2+ and 200 Mm Li+ For 240 S at 21 C
Other atoms:
Cl (3);
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6dph (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MN2+ and 200 Mm K+ For 120 S at 21 C
Other atoms:
K (3);
I (4);
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6dpi (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 40 S at 21 C
Other atoms:
Rb (3);
Cl (3);
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6dpl (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 720 S at 21 C
Other atoms:
Rb (6);
Cl (3);
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6dpm (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with An Rna/Dna Hybrid: Reaction in 10 Mm MG2+ and 200 Mm Rb+ For 1800 S at 21 C
Other atoms:
Rb (6);
Cl (3);
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6dpn (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MG2+ and 200 Mm K+ For 200 S at 21 C
Other atoms:
K (2);
I (4);
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6dpo (Mg: 3) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 E188A in Complex with An Rna/Dna Hybrid: Reaction in 2 Mm MG2+ and 200 Mm K+ For 360 S at 21 C
Other atoms:
K (1);
I (4);
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6dpp (Mg: 2) - Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 5 Mm MG2+ and 200 Mm Rb+ For 240 S at 21 C
Other atoms:
Rb (5);
Cl (3);
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6dpu (Mg: 12) - Undecorated Gmpcpp Microtubule
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6dpv (Mg: 6) - Undecorated Gdp Microtubule
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6dpw (Mg: 6) - Undecorated Gtpgammas Microtubule
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6dqx (Mg: 2) - Actinobacillus Ureae Class Id Ribonucleotide Reductase Alpha Subunit
Other atoms:
Cl (2);
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6dre (Mg: 1) - Adp-Ribosyltransferase Toxin/Immunity Pair
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6drh (Mg: 1) - Adp-Ribosyltransferase Toxin/Immunity Pair
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6ds1 (Mg: 4) - Crystal Structure of CJ0485 Dehydrogenase in Complex with Nadp+
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6dsu (Mg: 1) - Bst Dna Polymerase I Pre-Insertion Complex Structure
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6dsv (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+2) Structure
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6dsw (Mg: 1) - Bst Dna Polymerase I Pre-Chemistry (N) Structure
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6dsx (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+1 with Datp Soak) Structure
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6dsy (Mg: 1) - Bst Dna Polymerase I Post-Chemistry (N+1) Structure
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6dt1 (Mg: 1) - Crystal Structure of the Ligase From Bacteriophage T4 Complexed with Dna Intermediate
Other atoms:
Cl (2);
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6dta (Mg: 3) - Bacteriophage N4 Rna Polymerase II Elongation Complex 2
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6dti (Mg: 94) - Structure of the Thermus Thermophilus 30S Ribosomal Subunit Complexed with An Unmodifed Anticodon Stem Loop (Asl) of Escherichia Coli Transfer Rna Arginine 2 (TRNAARG2) Bound to An Mrna with An Cgu-Codon in the A-Site and Paromomycin
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6dtq (Mg: 4) - Maltose Bound T. Maritima MALE3
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6dtw (Mg: 1) - Hiv-1 Reverse Transcriptase Y181C Mutant in Complex with Jlj 578
Other atoms:
F (2);
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6du2 (Mg: 2) - Structure of SCP1 D96N Bound to Rest-PS861/4 Peptide
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6du3 (Mg: 2) - Structure of SCP1 D96N Bound to Rest-PS861/4 Peptide
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6due (Mg: 1) - Toxoplasma Gondii Myoa, A Class-Xiv Myosin, in the Pre-Powerstroke State
Other atoms:
F (4);
Al (1);
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6duf (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase V106A/F227L Mutant in Complex with Non-Nucleoside Inhibitor 25A
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6dug (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase K101P Mutant in Complex with Non-Nucleoside Inhibitor 25A
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6duh (Mg: 1) - Crystal Structure of Hiv-1 Reverse Transcriptase Y181I Mutant in Complex with Non-Nucleoside Inhibitor 25A
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6duk (Mg: 6) - Egfr with An Allosteric Inhibitor
Other atoms:
F (6);
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6duq (Mg: 12) - Structure of A Rho-Nusg Kow Domain Complex
Other atoms:
F (36);
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6dus (Mg: 2) - Structure of Salmonella Effector SSEK3 E258Q Mutant
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6dv9 (Mg: 1) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) Containing 5NT Rna with 4NT Spacer
Other atoms:
Zn (2);
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6dvk (Mg: 5) - Computationally Designed Mini Tetraloop-Tetraloop Receptor By the Rnamake Program - Construct 6 (Minittr 6)
Other atoms:
Co (4);
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6dw3 (Mg: 8) - SAMHD1 Bound to Cytarabine-Tp in the Catalytic Pocket
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6dw4 (Mg: 8) - SAMHD1 Bound to Cladribine-Tp in the Catalytic Pocket and Allosteric Pocket
Other atoms:
Na (1);
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6dw5 (Mg: 10) - SAMHD1 Bound to Gemcitabine-Tp in the Catalytic Pocket
Other atoms:
F (8);
Ni (1);
Na (4);
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6dw7 (Mg: 4) - SAMHD1 Without Catalytic Nucleotides
Other atoms:
Na (3);
Page generated: Wed Aug 13 05:20:13 2025
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