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Magnesium in PDB 2a5l: The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa

Protein crystallography data

The structure of The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa, PDB code: 2a5l was solved by V.V.Lunin, E.Evdokimova, M.Kudritska, J.Osipiuk, A.Joachimiak, A.M.Edwards, A.Savchenko, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.90 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.927, 62.927, 190.022, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 19.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa (pdb code 2a5l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa, PDB code: 2a5l:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 2a5l

Go back to Magnesium Binding Sites List in 2a5l
Magnesium binding site 1 out of 2 in the The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg199

b:22.4
occ:0.50
O A:LYS195 2.1 19.4 1.0
O A:HOH241 2.4 28.8 1.0
OXT A:SER198 2.4 39.1 1.0
C A:SER198 3.1 38.7 1.0
C A:LYS195 3.4 19.7 1.0
CA A:SER198 3.6 37.9 1.0
N A:SER198 3.9 35.0 1.0
O A:SER198 4.0 39.8 1.0
CA A:LYS195 4.2 18.3 1.0
N A:LEU196 4.3 19.1 1.0
C A:LEU196 4.3 24.3 1.0
O A:LEU196 4.4 25.3 1.0
CA A:LEU196 4.4 21.1 1.0
O A:HOH338 4.8 36.2 1.0
N A:GLY197 4.8 26.2 1.0
CB A:LYS195 4.9 18.7 1.0
O A:GLY194 4.9 17.5 1.0
C A:GLY197 4.9 33.0 1.0
CB A:SER198 5.0 38.7 1.0

Magnesium binding site 2 out of 2 in 2a5l

Go back to Magnesium Binding Sites List in 2a5l
Magnesium binding site 2 out of 2 in the The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg199

b:19.7
occ:0.50
O B:LYS195 2.2 18.8 1.0
O B:HOH212 2.5 27.9 1.0
O B:SER198 2.5 37.2 1.0
C B:SER198 3.2 36.5 1.0
C B:LYS195 3.4 17.8 1.0
CA B:SER198 3.4 35.9 1.0
N B:SER198 3.9 32.3 1.0
CA B:LYS195 4.1 16.7 1.0
OXT B:SER198 4.2 38.4 1.0
O B:HOH290 4.3 39.2 1.0
N B:LEU196 4.4 16.3 1.0
O B:LEU196 4.4 20.9 1.0
C B:LEU196 4.4 20.4 1.0
CA B:LEU196 4.5 17.5 1.0
O B:HOH319 4.6 26.8 1.0
CB B:SER198 4.6 35.9 1.0
OG B:SER198 4.6 38.8 1.0
CB B:LYS195 4.8 15.9 1.0
N B:GLY197 4.9 22.3 1.0
O B:GLY194 4.9 15.0 1.0
C B:GLY197 5.0 30.2 1.0

Reference:

V.V.Lunin, E.Evdokimova, M.Kudritska, J.Osipiuk, A.Joachimiak, A.M.Edwards, A.Savchenko. The Crystal Structure of the Trp Repressor Binding Protein Wrba From Pseudomonas Aeruginosa To Be Published.
Page generated: Sun Aug 10 09:01:33 2025

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