Atomistry » Magnesium » PDB 3jay-3jwr » 3jay
Atomistry »
  Magnesium »
    PDB 3jay-3jwr »
      3jay »

Magnesium in PDB 3jay: Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus (pdb code 3jay). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus, PDB code: 3jay:

Magnesium binding site 1 out of 1 in 3jay

Go back to Magnesium Binding Sites List in 3jay
Magnesium binding site 1 out of 1 in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1105

b:0.6
occ:1.00
O2B A:GTP1104 2.0 0.1 1.0
O2G A:GTP1104 2.2 0.9 1.0
PG A:GTP1104 2.4 0.2 1.0
O3G A:GTP1104 2.5 1.0 1.0
O3B A:GTP1104 2.5 0.5 1.0
PB A:GTP1104 2.7 0.0 1.0
O2A A:GTP1104 3.3 0.4 1.0
OD2 A:ASP254 3.6 0.3 1.0
O3A A:GTP1104 3.7 0.6 1.0
O1G A:GTP1104 3.9 0.2 1.0
O1B A:GTP1104 3.9 0.2 1.0
PA A:GTP1104 4.0 0.1 1.0
NH2 A:ARG255 4.1 0.2 1.0
OE2 A:GLU237 4.5 0.3 1.0
OE1 A:GLN258 4.6 0.7 1.0
CE1 A:HIS212 4.7 0.1 1.0
O1A A:GTP1104 4.7 0.3 1.0
CG A:ASP254 4.8 0.3 1.0
OH A:TYR59 4.9 0.8 1.0

Reference:

X.Yu, J.Jiang, J.Sun, Z.H.Zhou. A Putative Atpase Mediates Rna Transcription and Capping in A Dsrna Virus. Elife V. 4 07901 2015.
ISSN: ESSN 2050-084X
PubMed: 26240998
DOI: 10.7554/ELIFE.07901
Page generated: Wed Aug 14 17:08:28 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy