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Magnesium in PDB 3vk5: Crystal Structure of MOEO5 in Complex with Its Product Fpg

Protein crystallography data

The structure of Crystal Structure of MOEO5 in Complex with Its Product Fpg, PDB code: 3vk5 was solved by F.Ren, T.-P.Ko, C.-H.Huang, R.-T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.39
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.999, 84.516, 59.581, 90.00, 112.29, 90.00
R / Rfree (%) 16.8 / 18.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of MOEO5 in Complex with Its Product Fpg (pdb code 3vk5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of MOEO5 in Complex with Its Product Fpg, PDB code: 3vk5:

Magnesium binding site 1 out of 1 in 3vk5

Go back to Magnesium Binding Sites List in 3vk5
Magnesium binding site 1 out of 1 in the Crystal Structure of MOEO5 in Complex with Its Product Fpg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of MOEO5 in Complex with Its Product Fpg within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg800

b:10.3
occ:1.00
O B:PHE140 2.3 11.7 1.0
O A:PHE140 2.4 12.9 1.0
O B:ALA138 2.5 11.8 1.0
O A:ALA138 2.5 9.8 1.0
O B:LEU137 2.5 10.5 1.0
O A:LEU137 2.5 9.6 1.0
C B:ALA138 3.1 10.3 1.0
C A:ALA138 3.1 9.9 1.0
C B:PHE140 3.5 10.9 1.0
C A:PHE140 3.5 11.7 1.0
CA A:ALA138 3.5 9.9 1.0
CA B:ALA138 3.5 9.6 1.0
C B:LEU137 3.6 10.3 1.0
C A:LEU137 3.6 9.4 1.0
N B:PHE140 3.8 9.9 1.0
N A:PHE140 3.9 11.1 1.0
N A:ALA138 4.1 9.8 1.0
N B:ALA138 4.1 9.2 1.0
CA B:PHE140 4.1 10.2 1.0
CA A:PHE140 4.1 11.3 1.0
N B:ALA139 4.1 10.4 1.0
O B:HOH575 4.1 24.4 1.0
N A:ALA139 4.2 11.9 1.0
CB A:PHE140 4.3 11.1 1.0
CD2 A:PHE140 4.3 12.0 1.0
CB B:PHE140 4.3 10.4 1.0
CD2 B:PHE140 4.3 11.0 1.0
C A:ALA139 4.3 12.1 1.0
C B:ALA139 4.3 11.7 1.0
N B:PRO141 4.6 11.8 1.0
N A:PRO141 4.6 12.4 1.0
CA B:ALA139 4.7 9.8 1.0
CA A:ALA139 4.7 12.0 1.0
CG A:PHE140 4.8 10.7 1.0
CG B:PHE140 4.8 10.4 1.0
CD A:PRO141 4.8 12.9 1.0
CD B:PRO141 4.8 13.2 1.0
CB A:ALA138 4.8 11.8 1.0
CB B:ALA138 4.9 9.9 1.0
CA B:LEU137 4.9 9.7 1.0
O B:HOH569 4.9 26.0 1.0
O A:ALA139 4.9 15.0 1.0
CA A:LEU137 4.9 9.8 1.0
O B:ALA139 5.0 15.0 1.0

Reference:

F.Ren, T.-P.Ko, X.Feng, C.-H.Huang, H.-C.Chan, Y.Hu, K.Wang, Y.Ma, P.-H.Liang, A.H.-J.Wang, E.Oldfield, R.-T.Guo. Insights Into the Mechanism of the Antibiotic-Synthesizing Enzyme MOEO5 From Crystal Structures of Different Complexes Angew.Chem.Int.Ed.Engl. V. 51 4157 2012.
ISSN: ISSN 1433-7851
PubMed: 22431288
DOI: 10.1002/ANIE.201108002
Page generated: Thu Aug 15 13:03:48 2024

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