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Magnesium in PDB 4lv8: Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi

Protein crystallography data

The structure of Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi, PDB code: 4lv8 was solved by M.L.Reese, J.C.Boothroyd, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.67 / 1.72
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 53.400, 53.700, 86.800, 104.70, 95.30, 111.00
R / Rfree (%) 19.5 / 23

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi (pdb code 4lv8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi, PDB code: 4lv8:

Magnesium binding site 1 out of 1 in 4lv8

Go back to Magnesium Binding Sites List in 4lv8
Magnesium binding site 1 out of 1 in the Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:43.1
occ:1.00
O1B A:ADP601 2.1 36.3 1.0
O1A A:ADP601 2.1 29.8 1.0
O A:HOH897 2.2 37.9 1.0
O A:HOH986 2.4 44.4 1.0
PB A:ADP601 3.0 33.7 1.0
O A:HOH965 3.0 49.1 1.0
PA A:ADP601 3.1 30.7 1.0
O3B A:ADP601 3.3 41.7 1.0
O3A A:ADP601 3.4 29.8 1.0
OD2 A:ASP393 3.6 44.0 1.0
O2A A:ADP601 4.0 32.5 1.0
CG A:ASP393 4.1 34.7 1.0
O A:HOH980 4.3 46.5 1.0
OD1 A:ASP393 4.4 24.4 1.0
O2B A:ADP601 4.4 33.2 1.0
O5' A:ADP601 4.4 24.8 1.0
OD1 A:ASN394 4.6 31.6 0.8
OD1 A:ASN394 4.6 31.5 0.2
OD2 A:ASP244 4.7 55.1 1.0
O A:HOH863 4.7 39.8 1.0
C5' A:ADP601 4.8 22.0 1.0
CE1 A:HIS389 4.8 32.4 0.5
CB A:ASP393 4.9 28.4 1.0

Reference:

M.L.Reese, N.Shah, J.C.Boothroyd. Murine IRGA6 Bound to Toxoplasma ROP5C, A Pseudokinase Gdi To Be Published.
Page generated: Mon Aug 19 20:07:03 2024

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