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Magnesium in PDB 4m69: Crystal Structure of the Mouse RIP3-Mlkl Complex

Enzymatic activity of Crystal Structure of the Mouse RIP3-Mlkl Complex

All present enzymatic activity of Crystal Structure of the Mouse RIP3-Mlkl Complex:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of the Mouse RIP3-Mlkl Complex, PDB code: 4m69 was solved by T.Xie, W.Peng, C.Yan, J.Wu, Y.Shi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.57 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 106.443, 141.951, 107.129, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.6

Other elements in 4m69:

The structure of Crystal Structure of the Mouse RIP3-Mlkl Complex also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Mouse RIP3-Mlkl Complex (pdb code 4m69). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Mouse RIP3-Mlkl Complex, PDB code: 4m69:

Magnesium binding site 1 out of 1 in 4m69

Go back to Magnesium Binding Sites List in 4m69
Magnesium binding site 1 out of 1 in the Crystal Structure of the Mouse RIP3-Mlkl Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Mouse RIP3-Mlkl Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg403

b:35.1
occ:1.00
O1A A:ANP401 1.8 31.3 1.0
OD1 A:ASN148 1.9 34.4 1.0
O1B A:ANP401 1.9 31.2 1.0
OD2 A:ASP161 2.1 28.3 1.0
O2G A:ANP401 2.1 32.8 1.0
O A:HOH593 2.4 32.8 1.0
CG A:ASN148 3.0 35.0 1.0
PA A:ANP401 3.1 31.1 1.0
PB A:ANP401 3.1 31.7 1.0
CG A:ASP161 3.3 28.8 1.0
PG A:ANP401 3.4 34.0 1.0
O3A A:ANP401 3.5 31.4 1.0
ND2 A:ASN148 3.6 36.2 1.0
O5' A:ANP401 3.8 30.6 1.0
N3B A:ANP401 3.8 33.2 1.0
OG A:SER147 3.9 28.9 1.0
O A:SER147 3.9 28.1 1.0
NZ A:LYS51 4.0 30.2 1.0
CB A:ASP161 4.2 30.0 1.0
OD1 A:ASP161 4.2 28.6 1.0
CB A:ASN148 4.2 34.7 1.0
O3G A:ANP401 4.3 34.5 1.0
C A:SER147 4.4 28.3 1.0
O2A A:ANP401 4.4 31.4 1.0
CA A:ASN148 4.4 33.9 1.0
O A:HOH574 4.4 35.0 1.0
O A:HOH584 4.4 50.9 1.0
O2B A:ANP401 4.5 31.8 1.0
O1G A:ANP401 4.5 35.5 1.0
N A:ASN148 4.6 33.8 1.0
C3' A:ANP401 4.6 30.7 1.0
C2' A:ANP401 4.6 30.6 1.0
CB A:SER147 4.8 28.6 1.0
C8 A:ANP401 5.0 30.6 1.0
C5' A:ANP401 5.0 30.6 1.0

Reference:

T.Xie, W.Peng, C.Yan, J.Wu, X.Gong, Y.Shi. Structural Insights Into RIP3-Mediated Necroptotic Signaling Cell Rep V. 5 70 2013.
ISSN: ESSN 2211-1247
PubMed: 24095729
DOI: 10.1016/J.CELREP.2013.08.044
Page generated: Mon Aug 19 20:18:26 2024

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