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Magnesium in PDB 4s2u: Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli

Enzymatic activity of Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli

All present enzymatic activity of Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli:
2.7.6.1;

Protein crystallography data

The structure of Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli, PDB code: 4s2u was solved by V.I.Timofeev, Y.A.Abramchik, T.I.Muravieva, A.K.Iaroslavtceva, V.N.Stepanenko, N.E.Zhukhlistova, R.S.Esipov, I.P.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.36 / 2.71
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 104.599, 104.599, 125.780, 90.00, 90.00, 120.00
R / Rfree (%) 25 / 30.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli (pdb code 4s2u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli, PDB code: 4s2u:

Magnesium binding site 1 out of 1 in 4s2u

Go back to Magnesium Binding Sites List in 4s2u
Magnesium binding site 1 out of 1 in the Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:25.3
occ:1.00
OG1 A:THR228 2.0 50.8 1.0
O A:ASP224 2.2 61.7 1.0
OG1 A:THR225 3.0 52.5 1.0
C A:ASP224 3.4 55.6 1.0
CB A:THR228 3.5 54.4 1.0
N A:GLY226 4.0 51.1 1.0
N A:ASP224 4.0 47.9 1.0
CG2 A:THR225 4.0 54.9 1.0
N A:THR228 4.0 55.5 1.0
CB A:THR225 4.0 54.5 1.0
CA A:ASP224 4.1 49.8 1.0
CB A:ASP224 4.2 47.5 1.0
CG2 A:THR228 4.3 52.5 1.0
CA A:THR228 4.4 55.2 1.0
N A:THR225 4.5 54.4 1.0
N A:GLY227 4.6 54.4 1.0
CA A:THR225 4.7 55.2 1.0
CA A:GLY226 4.7 52.2 1.0
C A:THR225 4.8 52.9 1.0
C A:GLY226 5.0 53.5 1.0

Reference:

V.I.Timofeev, Y.A.Abramchik, T.I.Muravieva, A.K.Iaroslavtceva, V.N.Stepanenko, N.E.Zhukhlistova, R.S.Esipov, I.P.Kuranova. Crystal Structure of the Phosphorybosylpyrophosphate Synthetase From E. Coli To Be Published.
Page generated: Tue Aug 20 03:44:21 2024

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