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Atomistry » Magnesium » PDB 4yf6-4yoy » 4yfn | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Magnesium » PDB 4yf6-4yoy » 4yfn » |
Magnesium in PDB 4yfn: Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)Enzymatic activity of Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)
All present enzymatic activity of Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide):
2.7.7.6; Protein crystallography data
The structure of Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide), PDB code: 4yfn
was solved by
V.Molodtsov,
P.R.Fleming,
C.J.Eyermann,
A.D.Ferguson,
M.A.Foulk,
D.C.Mckinney,
C.E.Masse,
E.T.Buurman,
K.S.Murakami,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 4yfn:
The structure of Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide) also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)
(pdb code 4yfn). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide), PDB code: 4yfn: Jump to Magnesium binding site number: 1; 2; Magnesium binding site 1 out of 2 in 4yfnGo back to![]() ![]()
Magnesium binding site 1 out
of 2 in the Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)
![]() Mono view ![]() Stereo pair view
Magnesium binding site 2 out of 2 in 4yfnGo back to![]() ![]()
Magnesium binding site 2 out
of 2 in the Escherichia Coli Rna Polymerase in Complex with Squaramide Compound 14 (N-[3,4-Dioxo-2-(4-{[4-(Trifluoromethyl)Benzyl]Amino}Piperidin-1-Yl) Cyclobut-1-En-1-Yl]-3,5-Dimethyl-1,2-Oxazole-4-Sulfonamide)
![]() Mono view ![]() Stereo pair view
Reference:
V.Molodtsov,
P.R.Fleming,
C.J.Eyermann,
A.D.Ferguson,
M.A.Foulk,
D.C.Mckinney,
C.E.Masse,
E.T.Buurman,
K.S.Murakami.
X-Ray Crystal Structures of Escherichia Coli Rna Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with An Improved Fraction Unbound to Human Plasma Protein To Be Published.
Page generated: Sat Sep 28 23:17:53 2024
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