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Magnesium in PDB 4z51: High Resolution Human Septin 3 Gtpase Domain

Protein crystallography data

The structure of High Resolution Human Septin 3 Gtpase Domain, PDB code: 4z51 was solved by N.F.Valadares, J.N.Macedo, D.A.Leonardo, J.Brandao-Neto, H.M.Pereira, S.O.Matos, A.P.U.Araujo, R.C.Garratt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 75.12 / 1.86
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 51.280, 74.270, 79.210, 90.00, 108.50, 90.00
R / Rfree (%) 18.2 / 21.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the High Resolution Human Septin 3 Gtpase Domain (pdb code 4z51). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the High Resolution Human Septin 3 Gtpase Domain, PDB code: 4z51:

Magnesium binding site 1 out of 1 in 4z51

Go back to Magnesium Binding Sites List in 4z51
Magnesium binding site 1 out of 1 in the High Resolution Human Septin 3 Gtpase Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of High Resolution Human Septin 3 Gtpase Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:25.0
occ:1.00
O1B A:GNP401 2.0 19.8 1.0
O2G A:GNP401 2.0 22.8 1.0
O A:HOH562 2.1 23.0 1.0
OG1 A:THR102 2.1 26.6 1.0
OG A:SER75 2.2 28.4 1.0
O A:HOH547 2.2 25.3 1.0
PG A:GNP401 3.1 24.9 1.0
CB A:THR102 3.2 25.9 1.0
CB A:SER75 3.2 24.9 1.0
PB A:GNP401 3.2 21.3 1.0
N3B A:GNP401 3.3 20.3 1.0
O1G A:GNP401 3.7 27.4 1.0
N A:THR102 3.7 25.7 1.0
N A:SER75 3.9 22.4 1.0
CA A:THR102 4.0 25.4 1.0
OD2 A:ASP125 4.1 28.0 1.0
CA A:SER75 4.1 22.7 1.0
OD1 A:ASP125 4.2 28.0 1.0
O2B A:GNP401 4.2 21.0 1.0
O2A A:GNP401 4.2 24.7 1.0
O A:HOH543 4.2 37.2 1.0
O3A A:GNP401 4.3 24.0 1.0
CG2 A:THR102 4.3 27.8 1.0
O3G A:GNP401 4.3 26.4 1.0
O A:PRO100 4.4 29.0 1.0
CG A:ASP125 4.5 30.2 1.0
PA A:GNP401 4.5 24.4 1.0
O A:THR126 4.6 30.8 1.0
C A:LYS101 4.7 27.5 1.0
O1A A:GNP401 4.7 21.7 1.0
CA A:LYS101 4.9 27.9 1.0
CB A:LYS74 5.0 23.2 1.0

Reference:

N.F.Valadares, J.N.Macedo, D.A.Leonardo, J.Brandao-Neto, H.M.Pereira, S.O.Matos, A.P.U.Araujo, R.C.Garratt. High Resolution Human Septin 3 Gtpase Domain To Be Published.
Page generated: Sat Sep 28 23:55:56 2024

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