Magnesium in PDB 5ytb: RANY197A in Complex with RANBP1-CRM1

The structure of RANY197A in Complex with RANBP1-CRM1, PDB code: 5ytb was solved by Q.Sun, Y.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.30
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	105.285, 105.285, 305.726, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 22.9

The structure of RANY197A in Complex with RANBP1-CRM1 also contains other interesting chemical elements:

Chlorine

(Cl)

7 atoms

The binding sites of Magnesium atom in the RANY197A in Complex with RANBP1-CRM1 (pdb code 5ytb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the RANY197A in Complex with RANBP1-CRM1, PDB code: 5ytb:

Magnesium binding site 1 out of 1 in the RANY197A in Complex with RANBP1-CRM1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of RANY197A in Complex with RANBP1-CRM1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:45.2 occ:1.00 O2G A:GTP301 1.9 46.7 1.0 O1B A:GTP301 2.0 47.1 1.0 O A:HOH407 2.0 43.1 1.0 OG1 A:THR24 2.1 43.6 1.0 O A:HOH405 2.1 41.7 1.0 OG1 A:THR42 2.2 48.3 1.0 CB A:THR24 3.1 44.2 1.0 PG A:GTP301 3.2 48.1 1.0 CB A:THR42 3.2 49.2 1.0 PB A:GTP301 3.2 45.4 1.0 O3B A:GTP301 3.5 46.4 1.0 N A:THR42 3.7 50.0 1.0 O1A A:GTP301 3.9 43.8 1.0 N A:THR24 3.9 44.7 1.0 O3G A:GTP301 3.9 46.5 1.0 CA A:THR42 4.0 49.9 1.0 CA A:THR24 4.1 44.4 1.0 OD2 A:ASP65 4.1 51.3 1.0 CG2 A:THR24 4.2 43.0 1.0 OD1 A:ASP65 4.2 48.7 1.0 O3A A:GTP301 4.3 45.8 1.0 O2B A:GTP301 4.3 45.5 1.0 O1G A:GTP301 4.3 48.1 1.0 CG2 A:THR42 4.4 50.1 1.0 O A:HOH435 4.4 53.1 1.0 PA A:GTP301 4.5 46.5 1.0 CG A:ASP65 4.6 49.1 1.0 O A:VAL40 4.6 51.2 1.0 O A:THR66 4.7 47.5 1.0 O2A A:GTP301 4.8 44.6 1.0 C A:ALA41 4.8 50.0 1.0 CB A:LYS23 4.9 43.3 1.0

Q.Sun, Y.Zhang. RANY197A in Complex with RANBP1-CRM1 To Be Published.