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Magnesium in PDB, part 335 (files: 13361-13400), PDB 5ylz-5yw2

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 13361-13400 (PDB 5ylz-5yw2).
  1. 5ylz (Mg: 6) - Cryo-Em Structure of the Post-Catalytic Spliceosome From Saccharomyces Cerevisiae at 3.6 Angstrom
    Other atoms: Zn (6);
  2. 5yn2 (Mg: 1) - Crystal Structure of Apo Pullulanase From Klebsiella Pneumoniae in Space Group P43212
    Other atoms: Ca (4);
  3. 5yol (Mg: 12) - Crystal Structure of Octameric Form of Nucleoside Diphosphate Kinase From Acinetobacter Baumannii at 2.2 A Resolution
  4. 5ypx (Mg: 5) - Crystal Structure of Calaxin with Magnesium
  5. 5yq7 (Mg: 48) - Cryo-Em Structure of the Rc-Lh Core Complex From Roseiflexus Castenholzii
    Other atoms: Fe (5);
  6. 5yro (Mg: 2) - RANL182A in Complex with RANBP1-CRM1
    Other atoms: Cl (4);
  7. 5yrp (Mg: 2) - Crystal Structure of the Eal Domain of Mycobacterium Smegmatis Dcpa
  8. 5ysd (Mg: 1) - Crystal Structure of Beta-1,2-Glucooligosaccharide Binding Protein in Complex with Sophorotriose
  9. 5yse (Mg: 1) - Crystal Structure of Beta-1,2-Glucooligosaccharide Binding Protein in Complex with Sophorotetraose
  10. 5ysf (Mg: 1) - Crystal Structure of Beta-1,2-Glucooligosaccharide Binding Protein in Complex with Sophoropentaose
  11. 5ysp (Mg: 1) - Pyrophosphate-Dependent Kinase in the Ribokinase Family Complexed with A Pyrophosphate Analog and Myo-Inositol
  12. 5yst (Mg: 2) - RANM189D in Complex with RANBP1-CRM1
    Other atoms: Cl (6);
  13. 5ysu (Mg: 1) - Plumbagin in Complex with CRM1-RANM189D-RANBP1
    Other atoms: Cl (2); Na (1);
  14. 5yt3 (Mg: 2) - Structure of the Human Mitogen-Activated Protein Kinase Kinase 1 S218D and S222D Mutant
  15. 5ytb (Mg: 1) - RANY197A in Complex with RANBP1-CRM1
    Other atoms: Cl (7);
  16. 5ytc (Mg: 2) - Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with the Unnatural Base M-Fc Pair with Datp in the Active Site
  17. 5ytd (Mg: 2) - Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with the Natural Base Pair 5FC:Dgtp
  18. 5yte (Mg: 2) - Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with with Natural Dt:Datp Base Pair
  19. 5ytf (Mg: 3) - Structure of Large Fragment of Dna Polymerase I From Thermus Aquaticus Host-Guest Complex with the Unnatural Base M-Fc Pair with Da
  20. 5ytg (Mg: 3) - Structure of Large Fragment of Dna Polymerase I From Thermus Aquaticus Host-Guest Complex with the Unnatural Base I-Fc Pair with Da
  21. 5yth (Mg: 2) - Structure of Large Fragment of Dna Polymerase I From Thermus Aquaticus Host-Guest Complex with the Unnatural Base M-Fc Pair with Dg
  22. 5yty (Mg: 2) - Crystal Structure of Echinomycin-D(Acgacgt/Acgtcgt) Complex
    Other atoms: Mn (1);
  23. 5yu6 (Mg: 2) - Crystal Structure of Exportin-5:Rangtp Complex
  24. 5yu8 (Mg: 5) - Cofilin Decorated Actin Filament
  25. 5yus (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 2
  26. 5yut (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 3
  27. 5yuu (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 4
  28. 5yuv (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 5
  29. 5yuw (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 6
  30. 5yux (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 8
  31. 5yuy (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 9
  32. 5yuz (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 11
  33. 5yv0 (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 12
  34. 5yv1 (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 13
  35. 5yv2 (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 14
  36. 5yv3 (Mg: 4) - Dna Polymerase IV - Dna Ternary Complex 7
  37. 5yv5 (Mg: 2) - Crystal Structure of the Complex of Archaeal Ribosomal Stalk Protein AP1 and Archaeal Ribosome Recycling Factor AABCE1.
  38. 5yve (Mg: 1) - Crystal Structure of Human P2X3 Receptor in Complex with the Af-219 Negative Allosteric Modulator
    Other atoms: Na (1);
  39. 5yvt (Mg: 1) - Crystal Structure of the Alpha Gamma Heterodimer of Human IDH3 in Complex with Mg(2+) and Nadh
  40. 5yw2 (Mg: 2) - Crystal Structure of Adenine Phosphoribosyltransferase From Francisella Tularensis.
    Other atoms: Cl (8);
Page generated: Mon Dec 15 10:50:06 2025

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