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Magnesium in PDB 6p8u: Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex

Protein crystallography data

The structure of Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex, PDB code: 6p8u was solved by Q.Ye, K.D.Corbett, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 81.97 / 1.89
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 169.087, 43.373, 63.217, 90.00, 104.18, 90.00
R / Rfree (%) 18.9 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex (pdb code 6p8u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex, PDB code: 6p8u:

Magnesium binding site 1 out of 1 in 6p8u

Go back to Magnesium Binding Sites List in 6p8u
Magnesium binding site 1 out of 1 in the Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of P. Aeruginosa ATCC27853 Cdnd:HORMA2:Peptide 1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg401

b:50.6
occ:1.00
H A:SER50 2.8 33.2 1.0
O A:HOH614 2.9 39.0 1.0
OD2 A:ASP64 2.9 45.5 1.0
OG A:SER50 3.1 32.6 1.0
HG A:SER50 3.1 39.1 1.0
O A:HOH562 3.2 38.7 1.0
N A:SER50 3.7 27.7 1.0
O A:HOH660 3.7 36.6 1.0
O A:HOH524 3.7 43.1 1.0
HB3 A:SER50 3.8 35.3 1.0
HA3 A:GLY49 3.8 35.3 1.0
CB A:SER50 3.9 29.4 1.0
HB2 A:PHE200 3.9 37.8 1.0
HZ1 A:LYS56 4.0 42.8 1.0
HH22 A:ARG53 4.1 34.5 1.0
CG A:ASP64 4.1 42.1 1.0
O A:HOH567 4.2 24.6 1.0
HA2 A:GLY49 4.3 35.3 1.0
CA A:GLY49 4.4 29.4 1.0
O A:HOH669 4.4 64.3 1.0
CA A:SER50 4.4 27.6 1.0
HE2 A:LYS56 4.5 41.5 1.0
C A:GLY49 4.6 25.0 1.0
OD1 A:ASP64 4.6 47.0 1.0
NZ A:LYS56 4.7 35.6 1.0
NH2 A:ARG53 4.7 28.7 1.0
HB2 A:SER50 4.8 35.3 1.0
HZ3 A:LYS56 4.8 42.8 1.0
CB A:PHE200 4.9 31.4 1.0
HZ3 A:LYS182 4.9 37.0 1.0
H A:TYR51 4.9 34.6 1.0
HH21 A:ARG53 5.0 34.5 1.0
O A:ASP62 5.0 31.2 1.0

Reference:

Q.Ye, R.K.Lau, I.T.Mathews, E.A.Birkholz, J.D.Watrous, C.S.Azimi, J.Pogliano, M.Jain, K.D.Corbett. Horma Domain Proteins and A TRIP13-Like Atpase Regulate Bacterial Cgas-Like Enzymes to Mediate Bacteriophage Immunity To Be Published.
Page generated: Tue Oct 1 13:58:53 2024

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